Gene Rsph17029_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2140 
Symbol 
ID4896676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2268026 
End bp2268742 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID640112734 
ProductGntR family transcriptional regulator 
Protein accessionYP_001044015 
Protein GI126462901 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0432435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.768948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CGATCACGCT GCCTGCCCTC GAGGCGCCCC TCCGCCCGTC GGTCACCGAT 
CAGGTGTTCG ACCAACTGCA CGACCGCATC ATCGAGCTGG ACCTGCCGCC CGGCACCAAG
CTTTCCGAGA TCGAGGTCGC GCGGCAGTTC GGCGTCTCGC GCCAGCCGGT GCGCGATGCC
TTCTACCGCC TGTCGAAGCT GGGTTTCCTG TCCATCCGCC CGCAGCGTGC GACGACGGTC
TCGCAGATCT CGACCCGCAG CGTCATGCAG GCGCGCTTCA TCCGCGCGGC GATAGAGGCC
GAGACGGTGC GCGTGGCCTG CGAGCGGCTG ACCGAGGCCG ATCATGCCGC GCTCTGGCGG
CTCCTCGACC TCCAGCGCGA GGCCTCGGAG GCGCGCGACC GGCTGCGCTT CCACGCGCTC
GACGACCAGT TCCACCGCGA GCTCTGCGAC CGGTCGGGCT GCGGATTCGC CTGGGAGATC
GTCCGCGAGA ACAAGTCCCA CATGGACCGG GTGCGCTATC TCTCGCTGGC CTTCGCCTCG
CAGGACGCCT ATGGAGACCA CCTTGAGGTG ATGCAGGCCA TCGAGGCGCG CGACGCGCCC
GAGGCCATGC GGCGGATGCA CAGTCACCTC AGCCGCATCA AGATCCAGAT CGAGCGCATC
CGGCTCGATC ATCAGGCCTA TTTCGCACAG GAGGACGCAT GTCTGCCCGA TCTTTGA
 
Protein sequence
MTDAITLPAL EAPLRPSVTD QVFDQLHDRI IELDLPPGTK LSEIEVARQF GVSRQPVRDA 
FYRLSKLGFL SIRPQRATTV SQISTRSVMQ ARFIRAAIEA ETVRVACERL TEADHAALWR
LLDLQREASE ARDRLRFHAL DDQFHRELCD RSGCGFAWEI VRENKSHMDR VRYLSLAFAS
QDAYGDHLEV MQAIEARDAP EAMRRMHSHL SRIKIQIERI RLDHQAYFAQ EDACLPDL