Gene Rsph17029_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2139 
Symbol 
ID4896596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2266516 
End bp2267922 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content69% 
IMG OID640112733 
Productglucuronate isomerase 
Protein accessionYP_001044014 
Protein GI126462900 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.62363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGC TGCAGGAAGA TCGGCTGTTT CCGGTCGATG AGGGCACCCG GGCACTGGCC 
CGCTCGCTCT ATGCGACGGT GAAGGATCTG CCGATCATCT CGCCGCATGG GCACACCGAT
CCGCGCTGGT TCGCCGAGAA CGAGCCCTTC CCGGACCCCG CTCAGCTCTT CGTCACGCCC
GACCATTACG TCTTCCGCAT GCTCCATTCG CAGGGCATCC CGCTCGAGGC GATGGGGGTG
CCGCGCGTCG ATGGCGGCCC GACCGAGACG GACGGACGCA AGATCTGGCG GCTCTTTGCC
TCGAACTTCC ATCTCTTCCG CGGCACGCCC TCGCGGCTCT GGCTCGACCA TGCCTTCTCG
GAGGTGTTCG GCGTGAATGA GCGGCTGTCG GCCGAAACGG CGGATGCGGC CTACGACCAG
ATCGCCGATT GCCTCGCGCG GCCCGAGTTC CGTCCCCGCG CGCTCTTCGA GCGGTTCGGG
ATCGAGGCGA TCGCCACCAC GGAAAGCGCG CTCGACGACC TGCGCTGGCA CCGCATGATC
CGCGAGAGCG GCTGGCAGGG CAGGGTGGTC ACGGCCTACC GTCCCGATGC GGTGGTCGAT
CCCGAATTTG CGGGCTTCGC CGAGAATGTG GCGCAGCTGG GCCAGCTGAC CGGCGAGGAT
ACCGCGACCT GGGAAGGCTA TCTCGCCGCC CACCGCAAGC GCCGGGCCTA TTTCAAGGAG
TTCGGCGCCA CCTCTTCGGA CCATGGCCAT GCGACGGCGC GGACCGAGGA TCTGCCGCAG
GCCGAGGCGG CCGCGCTCTT TGCCAGGGCG CTGACGGGCG CCTGCACGGC CGAGGAGGCG
GATGCGTTCC GCGGCCAGAT GCTGACCGAG ATGGCGCGCA TGAGCCTCGA GGACGGGCTG
GTGCTCCAGA TCCATCCGGG CAGCTTCCGC AACCATTCCC GGCCCGTGCT CGACCGCTTC
GGCCGCGACA AGGGCTTCGA CATTCCGACC CGCACCGATT ACGTCCGCGC GCTGCGCCCG
CTTCTGTCGG CGGTGGGGGG TGATCCGCGG CTGACGGTGA TCGTCTTCAC GCTGGACGAG
ACCGCCTATG CGCGGGAACT GGCGCCCCTC GCCGGGGTCT ATCCGGCGCT GAAGCTCGGC
CCCGCCTGGT GGTTCCACGA CAGCCCCGAG GGGATGCGCC GCTTCCGCGA GATGACGACC
GAGACGGCGG GCTTCTACAA CACCGTGGGC TTCAACGACG ACACCCGCGC CTTCTGCTCG
ATCCCGGCCC GTCACGACGT GGCCCGGCGC GTGGATTGCG CCTTCCTGGC GACGCTGGTC
GCCACGGGGC GCCTCGACGC GGAGGAGGCG CCGGAGGTGG CGCACGATCT GGCCTACCGC
CTCGCGAAAG AGGCCTACAG GCTCTGA
 
Protein sequence
MGLLQEDRLF PVDEGTRALA RSLYATVKDL PIISPHGHTD PRWFAENEPF PDPAQLFVTP 
DHYVFRMLHS QGIPLEAMGV PRVDGGPTET DGRKIWRLFA SNFHLFRGTP SRLWLDHAFS
EVFGVNERLS AETADAAYDQ IADCLARPEF RPRALFERFG IEAIATTESA LDDLRWHRMI
RESGWQGRVV TAYRPDAVVD PEFAGFAENV AQLGQLTGED TATWEGYLAA HRKRRAYFKE
FGATSSDHGH ATARTEDLPQ AEAAALFARA LTGACTAEEA DAFRGQMLTE MARMSLEDGL
VLQIHPGSFR NHSRPVLDRF GRDKGFDIPT RTDYVRALRP LLSAVGGDPR LTVIVFTLDE
TAYARELAPL AGVYPALKLG PAWWFHDSPE GMRRFREMTT ETAGFYNTVG FNDDTRAFCS
IPARHDVARR VDCAFLATLV ATGRLDAEEA PEVAHDLAYR LAKEAYRL