Gene Rsph17029_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2137 
Symbol 
ID4895307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2264904 
End bp2265449 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID640112731 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001044012 
Protein GI126462898 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.103028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.59177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGACG GATTGAAGAG ACTGGCCCTC GTCATGGGGG GGCTGGCGCG GATCGCGCTG 
TGGATCGCGG GCGGAGGCCT CGTGCTGATG ACGGTCTTCG TCTTCGCGCA GGTCTTCGTG
CGCTATGTGA TGAACGACAG CCTGCACTGG GCGGAACCGG CTGCGGTCAT GATCATGGCC
TGGTTCATCT TCCTCGGCGC CGCGGTCGGT GTGCGCGAGG GCTATCACCT GTCCTTCGAC
GTGCTGCTCT ATTTCCTGCC CAAGGGCGTC GCGCCCTGGC TGCACACGAT CTCGGACTTC
TTCGTGGCGG CCTTCGGCTT CGGCATGGCC TGGTACGGCT GGTCGCTCGC CGCGCGGGCC
GCCAACGATC TCATGCCCGG CCTCGGCATC AGCCGCGGCT TCGAATTCGC GCCGCTGATC
TCGGGCGGCA CGCTGCTTGT CCTCTTCTCC ATCGAGCGCG TCCTGCGCCG CGCCGCGGGC
CTTCACACCG CCCGCTTCGG CGAGGATGCG CCGGAAGAGC CCGAAACCAC CACCACGGGG
GCCTGA
 
Protein sequence
MQDGLKRLAL VMGGLARIAL WIAGGGLVLM TVFVFAQVFV RYVMNDSLHW AEPAAVMIMA 
WFIFLGAAVG VREGYHLSFD VLLYFLPKGV APWLHTISDF FVAAFGFGMA WYGWSLAARA
ANDLMPGLGI SRGFEFAPLI SGGTLLVLFS IERVLRRAAG LHTARFGEDA PEEPETTTTG
A