| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2125 |
|---|
| Symbol | |
|---|
| ID | 4896374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2252977 |
|---|
| End bp | 2254527 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640112719 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001044000 |
|---|
| Protein GI | 126462886 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG ACTGGCTGGG CGTCCTCGCC TGGGTTCTGG CCGCGGTGGC CGCGGTGGCA
GGTCTCTCGG CCTTCACCTG GCGCTCGTGG CGGCGCTTCG CACGTCAGGC CCGCGGCGCC
GTCACCACGG CCCTGCCGCG CACCGGCCCC GAGACGGAGC TCGATGCGCT CTTCGCCCCG
CTCGAGGCCG ACCATCCCGG CCGCTCGGGC CTGCTCGCGC TGCTCGACAA TCCCGACGCC
TACGCCGCCC GGGCGCTCTC GGCCCGGATG GCCGGGCGCT CGCTCGACCT GATGTATTAC
ATCTGGCGGA CCGACCTCAC CGGCTGGCTC CTCATCGAGG AACTGCTGGC GGCCGCCGAC
CGCGGGGTGC GGGTGCGGCT TCTCCTCGAC GACGTGAATG TGCAGGGTTT CGACCGCGCC
TTCCTCGCGC TGAACCAGCA CCCGAACGTC GAGGTGCGGC TCTTCAACCC GATCCGCAAT
CGCGGCCATG TCCTGCGCCG TACGCTCGAG ATGCTGCTGG GGCTGTCCCG CTTCAACCGC
CGGATGCACA ACAAGGCCTG GATTGCCGAT GGTCGGCTGG CCATCGTGGG CGGGCGCAAC
ATCGGCGACA CCTACTACGA CGCCGAGGAG AGCGGCCTTG CAATGTCGCG CGACGCCGAC
GTGATGCTGG CGGGTCCCGT GGTGGCCGAG GTCGAGGGGC TTTTCGACAG CTACTGGAAC
CTCGGTCTCG CACTGCCGAT CCTGACGCTC TGGCCCGAGT TCAAGGTGAA TGTCCGCAGC
TTCCAGCGCC GCATGATGCG CCACAACCGG GCGCCCGAGG CGGTCTCGTT CCTGCGCCGC
ACCATGGCCG GGCGCGACGG GCCCACGCTT CTGACCGCGC GCCTGCGCTG GACCGACAAG
GTCACGCTGC TGGCCGACCC TCCCGACAAG GCGATGGGCC AGAGGTCGGG GCCGTGGATG
GGCGAGGCGA TCACCGCGCT CCTGCGTGCG GCCGAGCGCG AGGTGCGGCT CATCACGCCC
TACTTCGTGC CCGGCAACGA CGGCTGCGAC CTGCTGACCG GGCTCGCGCA GCGGGGGGTG
CGGCTCTCGA TCATGACCAA TGCCCTGTCG GTGACCGACA TGGTGCTGGT GCACGGCGCC
TATCGCCACT ACCGGCTGCC ACTGCTGAAG GCCGGGGCGG AGCTCTACGA ATTCGGCCCC
CCGCCGCGCC CCTGCGGACG ACGCGACCTG CTGCACACCA AGGTCTTCCT GATCGACGGG
CGGCAGGCGG TGGTGGGGTC GCTGAACTTC GACCTGCGCT CGGCCTTCAT GAACACGGAG
CTGGGCGTGC TCTTCGAGGA GCCCGATCTC TTTGCCGAGC TCGAGGCGAT GTTCGACCGC
CAGAGCGCCC CCGACGAGGC GCACCGCCTG TCGCTCGAGG AGGGTCGGCT GCGCTGGTCG
GTGACCGAGG AGGGACGCGC CGCCCTCGCC CGGTTCGAGC CGGACTCGCC CCCCGCGCTG
CGGGCCGTCT CCTGGGTGGT GGGGCATCTG CCGATCCAGA GCTACCTCTG A
|
|---|
| Protein sequence | MIDDWLGVLA WVLAAVAAVA GLSAFTWRSW RRFARQARGA VTTALPRTGP ETELDALFAP
LEADHPGRSG LLALLDNPDA YAARALSARM AGRSLDLMYY IWRTDLTGWL LIEELLAAAD
RGVRVRLLLD DVNVQGFDRA FLALNQHPNV EVRLFNPIRN RGHVLRRTLE MLLGLSRFNR
RMHNKAWIAD GRLAIVGGRN IGDTYYDAEE SGLAMSRDAD VMLAGPVVAE VEGLFDSYWN
LGLALPILTL WPEFKVNVRS FQRRMMRHNR APEAVSFLRR TMAGRDGPTL LTARLRWTDK
VTLLADPPDK AMGQRSGPWM GEAITALLRA AEREVRLITP YFVPGNDGCD LLTGLAQRGV
RLSIMTNALS VTDMVLVHGA YRHYRLPLLK AGAELYEFGP PPRPCGRRDL LHTKVFLIDG
RQAVVGSLNF DLRSAFMNTE LGVLFEEPDL FAELEAMFDR QSAPDEAHRL SLEEGRLRWS
VTEEGRAALA RFEPDSPPAL RAVSWVVGHL PIQSYL
|
|---|
| |