| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2120 |
|---|
| Symbol | |
|---|
| ID | 4895195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2248157 |
|---|
| End bp | 2248711 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640112714 |
|---|
| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
|---|
| Protein accession | YP_001043995 |
|---|
| Protein GI | 126462881 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
|---|
| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.436061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTCG TCCTCGGCGT CTCGGGCGCA TCGGGCGCGG CGCTGGCCGC CGCCTGCGCG
CGGCACCTGT CGGCTCTGGG GGCCGAGATC GACCTCGTGA TCTCGAAGGC GGGCGAGCGG
ACGCTGGTCG AGGAGATCGG CCCCGAGGCG GCCGACGCGC TCCGCGCGCA GGCGACGCGG
GTTCACGCCA TCATGAATGT GGGCGCGGCC ATCGCCTCGG GCTCGGCGCC CGTGGCGGGG
ATGATCGTGG CCCCCTGCTC GATGCGCTCG CTCGCGGCCA TCGCCCACGG GCTCGACGAC
AACCTGCTGA CCCGCGCGGC TTCGGTGCAG CTGAAGGAGC GGCGGCGGCT CGTGCTCCTC
GCGCGCGAAA GCCCGCTGAC GCTCGCGCAC CTGCGCAACA TGACGGCCGT CACCGAGATG
GGCGGGATCG TGGCGCCGCC GGTGCCCGCC TTCTACCTCC GCCCCGAGAG CCTTGCGGCC
GCCGTCGAGC AGATCGCGGC CCGCGCGGTG GACCTTCTGG GCCTCGGCCG CCCGCAGGCG
CAGGCCTGGG AATAG
|
|---|
| Protein sequence | MRVVLGVSGA SGAALAAACA RHLSALGAEI DLVISKAGER TLVEEIGPEA ADALRAQATR
VHAIMNVGAA IASGSAPVAG MIVAPCSMRS LAAIAHGLDD NLLTRAASVQ LKERRRLVLL
ARESPLTLAH LRNMTAVTEM GGIVAPPVPA FYLRPESLAA AVEQIAARAV DLLGLGRPQA
QAWE
|
|---|
| |