| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2099 |
|---|
| Symbol | |
|---|
| ID | 4896564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2221452 |
|---|
| End bp | 2222666 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640112693 |
|---|
| Product | isocitrate dehydrogenase |
|---|
| Protein accession | YP_001043974 |
|---|
| Protein GI | 126462860 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0538] Isocitrate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.369839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGA TCAAGGTAGC GAACCCCGTC GTCGAGCTCG ACGGCGACGA GATGACCCGC
ATCATCTGGG ACTTCATCAA GCAGAAGCTG ATCCTGCCCT ACCTCGACAT CGACCTGCAT
TACTACGATC TCGGCATCGA GGAGCGCGAC CGCACCGAGG ACAAGATCAC GGTCGATGCG
GCCCATGCGA TCAAGCAGTA TGGCGTGGGC GTGAAATGCG CCACCATCAC GCCGGACGAG
GCGCGGGTCG AGGAATTCGG CCTGAAATCG ATGTGGAAGA GCCCGAACGG CACGATCCGC
AACATCCTCG GCGGCGTGAT CTTCCGCCAG CCGATCATCT GCCGCAACGT CCCGCGCCTC
GTGCCGGGCT GGACGAAGCC CATCGTCGTC GGCCGCCATG CCTTCGGCGA CCAGTATCGC
GCGACCGACT TCCGCTTCCC GGGCAAGGGC AAGCTCACGC TGAAATTCGT GGGCGAGGAC
GGCGCGGTGA TCGAGCGCGA GGTGTTCGAC GCGCCGGGCT CGGGCGTGAC CATGGCGATG
TACAACCTCG ACCAGTCGAT CATCGACTTC GCGCGCGCCT CGATGAACTA CGGGCTGAAT
CTCGGCTGGC CGGTGTACCT CTCGACCAAG AACACGATCC TCAAGGCCTA CGACGGGCGC
TTCAAGGACC TCTTCCAGCA GGTCTACGAG GAGGAATTCG CCGAGAAGTT CAAGGCGGCG
GGCATCACCT ACGAGCACCG GCTGATCGAC GACATGGTGG CCTCGGCGCT GAAATGGTCG
GGCGGCTATG TCTGGGCCTG CAAGAACTAC GACGGCGACG TGCAGTCGGA TACCGTGGCG
CAGGGCTTCG GCTCGCTCGG GCTGATGACG AGCGTGCTGA TGACGCCGGA CGGGCAGACG
GTGGAGGCCG AGGCCGCGCA TGGCACGGTC ACGCGGCACT TCCGCCAGCA TCAGGCGGGC
AAGGAGACCT CGACCAACTC GATCGCCTCG ATCTACGCCT GGACGGGGGG CCTCAAACAC
CGCGCCAAGC TCGACGGCAA TGCCGATCTC GCCCGCTTCG CCGAGACGCT CGAGCGGGTC
ACGGTGCAGA CGGTCGAGGA CGGCTTCATG ACGAAGGACC TCGCGCTCCT CGTGGGCCCG
GATCAGAAGT GGCTGACCAC GATGGGCTAT CTCGAGAAGG TCGACGAATA TCTCGACCGC
GCGCTCGGCG CCTGA
|
|---|
| Protein sequence | MSKIKVANPV VELDGDEMTR IIWDFIKQKL ILPYLDIDLH YYDLGIEERD RTEDKITVDA
AHAIKQYGVG VKCATITPDE ARVEEFGLKS MWKSPNGTIR NILGGVIFRQ PIICRNVPRL
VPGWTKPIVV GRHAFGDQYR ATDFRFPGKG KLTLKFVGED GAVIEREVFD APGSGVTMAM
YNLDQSIIDF ARASMNYGLN LGWPVYLSTK NTILKAYDGR FKDLFQQVYE EEFAEKFKAA
GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLMTPDGQT
VEAEAAHGTV TRHFRQHQAG KETSTNSIAS IYAWTGGLKH RAKLDGNADL ARFAETLERV
TVQTVEDGFM TKDLALLVGP DQKWLTTMGY LEKVDEYLDR ALGA
|
|---|
| |