Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2085 |
Symbol | |
ID | 4896807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2208647 |
End bp | 2210503 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640112679 |
Product | ABC transporter related |
Protein accession | YP_001043960 |
Protein GI | 126462846 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.836292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCCG ATCCCGCCCC CGACCTGCCC GGATTTCGCG CCCGCTGGGC GGCCCTGCGC AATGTCGCGC CCTTCCTCGG CATGGTCTGG CAGGCGAGCC CCGGCCTTCT GGTCCTGAGC CTCGTCCTGA GGCTCGCCCG GGCGCTGATC CCGGTCACGG CGCTCTGGTT CGGCAAGCTC ATCATCGACG AGGTGGTGCG CCTCGCGGGA AGCCCGCTGC CCGCGACGGG CCCGCTCGGC TGGATCGGAG CCGAAGGCGC GAGCACGCTC GTCCTGCTGC TCGGGGCGGA GTTCCTGCTC GCCATCCTGT CGGATCTTCT CGGACGGCTC GGCGGTCTCA CCGACACGCT CCTGACGGAG CGGCTCACCA TGTCCTCCTC GGTGCGGCTG ATGCACCACG CGGCCAGCCT CGATCTGGCC GCCTTCGAGG ATGCGGGGTT TCAGGATCGG CTCGAGCGGG CGCGGCGGCA GTCGGGCGGG CGCATGACGC TGACGGGCCA GATCCTCTCG CTGATGCAGG ATGCGGTCAC CGTGGCCTCG CTTGCGGGCG GGCTTCTGCT CTACAACCCG TGGCTCATCC TGCTTCTGGT GGCGGCGTTA GTGCCGGCCT TCCTCGGCGA GGCGCATTTC AACGCGCAGA ACTACAATCT CGATTTCCGC CGCACGCCCG AGCGGCGGGA ACTCGATTAT ATCCGCGTGA CCGCAGCCGG AGTGGAAACG GCCAAGGAGA TCAAGATCTT CGGCCTCGCG CCCTTCCTGA TCGAGCGCTA CCGCACCCTC TCGGAGAGCT TCTATGCCGC GCGGCGGCGC ATCGCCTCGG CGCGGGCGGT CTGGGGCACG CTCTTCAGCG CGCTGGGGAC GGCGGGCTAT TATCTGGCCT ACCTCTGGAT GATCGGCGCC ACATTGTCGG GCCGGCTCTC GATCGGCGAT CTGACCTTCC TCGCTGGCTC GTTCCTCCGG CTGCGCGGGC TGGTCGAAGG ACTGCTCACG GGCTTCTCCA CCACCGCCGC GCAGGCGCTC TATCTCGAGG ACCTGTTCGG CTTCTTCCGG CAGCAGCCCA CCATCCTCGC CCCCGCCGAG CCGCGCCCCG TGCCCAAACC GATCCGCGAG GGCTTCCGCT TCGAGAAGGT GGGCTTCCGC TATCCGGGGG CCGGCGGCTG GGCGGTGCGC GATCTCAGCT TCACGCTGAA GGCGGGCGAG ACGCTCGCGC TCGTGGGCGA GAATGGCGCG GGCAAGACCA CGCTCGTCAA GCTGCTGGCC CGGCTCTACG ATCCGGACGA GGGGCGGATC CTTCTGGACG GACAGGATCT GCGCAGCTTC GATCCGGTGG CGCTGCGCGG CGCGATGGGC GTGATCTTTC AGGATTTCGT GCGCTACTCG ATGAGTGCGG GCGAGAATAT CGCCGTGGGC CGGATCGAGG CGCGTTCCGA GGAAGACCGC ATCGCCGAGG CCGCCCGGCG CAGCCTCGCC GACCGGATCG TTGCGCGGAT GCCCGAGGGC TACGGCCAGA TGCTGGGCAA GCGTTTCCGG GAGGGCGTGG ATCTCTCGGG CGGCGAATGG CAGAAGTTCG CCATCGCGCG GGCCTACATG CGCGACGCCG AGGTGCTGAT CCTCGACGAG CCGACGGCGG CGCTCGATGC ACGGTCCGAG TTCGAGGTGT TCCAGCGGTT CAAGGAATTG TCGGCGGGCC GGACGGCAGT GCTGATCTCA CACCGGTTCT CGTCGGTGCG CATGGCCGAC CGGATTCTCG TGCTGGCGGG CGGGCGGGTC GAGGCCAGCG GCACCCACGA GGAGCTTCTG GCCCAGCCGG GCCGCTATGC GGAACTGTTC GAATTGCAGG CGGCCGGGTA CAGGTGA
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Protein sequence | MRPDPAPDLP GFRARWAALR NVAPFLGMVW QASPGLLVLS LVLRLARALI PVTALWFGKL IIDEVVRLAG SPLPATGPLG WIGAEGASTL VLLLGAEFLL AILSDLLGRL GGLTDTLLTE RLTMSSSVRL MHHAASLDLA AFEDAGFQDR LERARRQSGG RMTLTGQILS LMQDAVTVAS LAGGLLLYNP WLILLLVAAL VPAFLGEAHF NAQNYNLDFR RTPERRELDY IRVTAAGVET AKEIKIFGLA PFLIERYRTL SESFYAARRR IASARAVWGT LFSALGTAGY YLAYLWMIGA TLSGRLSIGD LTFLAGSFLR LRGLVEGLLT GFSTTAAQAL YLEDLFGFFR QQPTILAPAE PRPVPKPIRE GFRFEKVGFR YPGAGGWAVR DLSFTLKAGE TLALVGENGA GKTTLVKLLA RLYDPDEGRI LLDGQDLRSF DPVALRGAMG VIFQDFVRYS MSAGENIAVG RIEARSEEDR IAEAARRSLA DRIVARMPEG YGQMLGKRFR EGVDLSGGEW QKFAIARAYM RDAEVLILDE PTAALDARSE FEVFQRFKEL SAGRTAVLIS HRFSSVRMAD RILVLAGGRV EASGTHEELL AQPGRYAELF ELQAAGYR
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