| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2077 |
|---|
| Symbol | |
|---|
| ID | 4897488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2198750 |
|---|
| End bp | 2199250 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640112671 |
|---|
| Product | Lipocalin family protein |
|---|
| Protein accession | YP_001043952 |
|---|
| Protein GI | 126462838 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00774456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCGAC TGACGGCCCT GCCTCTCCTG CTGCTCGCGG CCTGCGCCCC CAAGGTGCCG
GAGCCGCCGC AAACCTTCCG CGACACGAAC CAGCCGATCT GGTCGAACGC CGTGTTCGAG
CCGGCGCGGA TCGCCGGCGA CTGGCAGGAG GTGGCGGCCT TTGCCGCGCC GGGCGCCTGC
CGCCCCGGCG GCGTCGCGAT CCGGCCCGCG GCGGCGGGGC TCGAGATGAA CGGACGGCTC
TGCCTCGGCG GACGCGAGAC GGCGCTGGCC GGGCCTCTGG CCGTCACCGG CCCCGGGCGC
CTGTTGCCCG CCGGCGCGAC CGAGCCCTGG TGGGTGCTCT GGGTCGATAC CGATTACCGG
ACCCTCGCCC TCGGCACGCC CTCGGGACGG TTCGGCGTGC TTCTGAACCG GGGCGGGCCC
CTGCCGCCCG ACCGGCTGGC CGCCGCCCGC GAGATCCTCG AATGGAACGG CTACGATCTC
GGGCGGTTGA CCCGGTTCTG A
|
|---|
| Protein sequence | MSRLTALPLL LLAACAPKVP EPPQTFRDTN QPIWSNAVFE PARIAGDWQE VAAFAAPGAC
RPGGVAIRPA AAGLEMNGRL CLGGRETALA GPLAVTGPGR LLPAGATEPW WVLWVDTDYR
TLALGTPSGR FGVLLNRGGP LPPDRLAAAR EILEWNGYDL GRLTRF
|
|---|
| |