Gene Rsph17029_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2054 
Symbol 
ID4896385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2178406 
End bp2178942 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID640112647 
Producthypothetical protein 
Protein accessionYP_001043929 
Protein GI126462815 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.941443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTC CCCTTCTGCG CGCCTTCTGG TCCGACCGCC GCGGCAGCGC CACCGTCGAG 
ATGGTGCTGG TGCTGCCCCT GCTGGTCTGG GCCTATCTCG GGATCTATGT CTTCTTCGAC
GCCTTTGCGA AGATCACCGT CTCGTCCAAG GCCACCTACA CGATCTCGGA CATGCTCTCG
CGCCAGCGCA GCTCGGTCGA CGGGACCTTC CTTGCCAATG CCCATGGCCT GTTCGACTGG
CTCACCGGCG CGCGGGCGAC CTCCATCCGC GTGAGCAGCA TCACCTGGGA CGAAACGAGC
CAGAGCTACG AGGTGCAATG GTCCTTCGCC GAAGGGGGCC CCGACATCCA GACGAACGCC
ACCATCGGGG ATTATGAGGA CCGGATCCCG GTGCTGCCCG AGGGCGATTA TCTCATCCTG
GTCGAGACCT GGATGGATTA CACGCCGCTC TTCCTCCAGT TTCTCGACCC GTTCACCTTC
ACCGAATTCA CCGTGACCCG GCCGCGCTTC ATGCCGAAGC TCGACTTCAC CGGCTGA
 
Protein sequence
MRRPLLRAFW SDRRGSATVE MVLVLPLLVW AYLGIYVFFD AFAKITVSSK ATYTISDMLS 
RQRSSVDGTF LANAHGLFDW LTGARATSIR VSSITWDETS QSYEVQWSFA EGGPDIQTNA
TIGDYEDRIP VLPEGDYLIL VETWMDYTPL FLQFLDPFTF TEFTVTRPRF MPKLDFTG