Gene Rsph17029_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2050 
SymboldnaG 
ID4896458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2172302 
End bp2174233 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content71% 
IMG OID640112643 
ProductDNA primase 
Protein accessionYP_001043925 
Protein GI126462811 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.279269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CACCCGGATT CCTCGACGAA CTGCGCAATC GCGTCCCGCT CTCGCAGGTG 
GTCGGGCGCA AGGTGACGTG GGATCTGCGC AAGTCGAACC AGGGCAAGGG CGACTTCTGG
GCGCCGTGTC CCTTCCATCA GGAGAAGTCG GCGAGCTTTC ACGTCGACGA TCGCAAGGGC
TTCTATTACT GCTTCGGCTG CCATGCGAAG GGCGATGCCA TCGCCTTCGT GAAGGACACC
GAGAATGTGG GCTTCATGGA GGCGGTCGAG ATCCTTACGC GCGAGGCGGG GATGGCGATG
CCGGCCCGCG ATCCGCGCGC GGCCGAGAAG GCCGACCGGC GGAGCCAGCT TGCCGAGGTG
ATGGAGGAGG CGGTGAGGTT CTACCGCCTG CAGTTGCGCA CCGGGGCGGC ATCGGCCGCG
CGCGACTATC TTGCGCGGCG CAGGCTGTCG GAGGAGGGGC AGGAGCGGTT CGGCATCGGC
TTCGCGCCGG ACGCGCGGCA GGCGCTGTTT CAGGCGCTGA CCGGCAAGGG GATCGCGCCG
GATCTGCTGG TCGAGGCCGG GCTCTGCGCG CGCCCCGAGG ATGGCGGCGC GCCCTATGAC
CGGTTCCGCG GCCGCATCAT CTTTCCGATC CGCGACGCGC GGGGGCGGGC GATCAGCCTC
GGCGGCCGGG CGATGGATCC GGCGGCGCGG GCGAAATATC TCAACGGGCC CGAGACGCCG
CTCTTCGACA AGGGGCGCAA CCTCTACAAT GCAGGGCCGG CGCGCGAGGC GGCGGGCAAG
GGCCAGCCGC TCGTGGTGGC CGAAGGCTAC ATGGATGTGA TCGCCCTGTC GGAGGCGGGG
TTCCGGGCCA CGGTGGCCCC CCTCGGCACC GCCATCACCG AGGACCAGCT GCGGCTCATG
TGGCGCATAC ATCCCGAGCC GGTGATCGCG CTCGACGGGG ATGCGGCGGG CATCCGGGCG
GCGCTGCGGG TGGTGGATCT GGCGCTGCCG CTTCTCGAGG CGGGGCAGGG GCTGCGCTTT
GCGGTGCTGC CGCCGGGGCT CGATCCCGAC GATCTGATCC GCGCCGAGGG GGCTTCCGCC
ATGGGGCGCG TGCTCGAGGC CGCGCAGCCG ATGGTGGGGC TTCTGTGGCG GCGCGAGACC
GAAGGCCATG TCTTCGACAG CCCCGAGCGG CGTGCGGCGC TGGACAAGCG GCTGCGCGCG
GCGGTGCAGC GGATCGCCGA TCCGAGCATC CGGCGCCACT ACGGGGACGA GCTGAACCGG
CTCCGGATGG AGATCTTCGG CACCTCCGTG CCGCGGCGCG CCTTCCACCG CGGCGGCAAA
CGCGAGCCTC TGGCGGTGGC GCCCCATCCT TCGACGCGCG CCTCGCTTCT GGCGACGGCG
GCGGGCGAGC GGATCGAGGA GGAGATGCGG CTCGGCGTGA TTCTCGCCAC CTGCGCGCTG
CATCCGACGC TGATCCACGA GTTCGAGACG GCGCTCGAGG CGCTGGAGCT GTCCGATCCC
GATGATCGGG CGCTCCACCG GGTGCTTCTC GCCGCCGCCG GGATGGCCGA GGCCGACACG
GCGCGGGGTG TGATCCGTGC CGAGGCGGGC CCGGCCCTTG AAAGGCTGCT GGCGCTGACC
CATGTTCGCA TCTGCCCGTC GGTGCGCCAC CCCGGGGATC TCGAGATGGC GCGCATGTGC
CTGGCCGAGG AGCTCGCGAA GCTCGAGGCC CGGCGCGGCG CACGGCAGGA AATCGAGGAG
GCGGTCGAGG ATCTGGCGGG TCTCGTGGAC GAGGGGCTGA CGTGGCGCCT GTCGCAGGCG
GCGGAGGCGC GGCATCGTGC CGAACGGGCC CGTCTTGACG ACTCGTCCGA CCTTGGCGAA
GACCGGGCCG CCCTGTCGAG ATCGCTGCAG GAGATGATCG ATCGCCAGAT CTGGGTAAAG
AAAAGGGGCT GA
 
Protein sequence
MSLPPGFLDE LRNRVPLSQV VGRKVTWDLR KSNQGKGDFW APCPFHQEKS ASFHVDDRKG 
FYYCFGCHAK GDAIAFVKDT ENVGFMEAVE ILTREAGMAM PARDPRAAEK ADRRSQLAEV
MEEAVRFYRL QLRTGAASAA RDYLARRRLS EEGQERFGIG FAPDARQALF QALTGKGIAP
DLLVEAGLCA RPEDGGAPYD RFRGRIIFPI RDARGRAISL GGRAMDPAAR AKYLNGPETP
LFDKGRNLYN AGPAREAAGK GQPLVVAEGY MDVIALSEAG FRATVAPLGT AITEDQLRLM
WRIHPEPVIA LDGDAAGIRA ALRVVDLALP LLEAGQGLRF AVLPPGLDPD DLIRAEGASA
MGRVLEAAQP MVGLLWRRET EGHVFDSPER RAALDKRLRA AVQRIADPSI RRHYGDELNR
LRMEIFGTSV PRRAFHRGGK REPLAVAPHP STRASLLATA AGERIEEEMR LGVILATCAL
HPTLIHEFET ALEALELSDP DDRALHRVLL AAAGMAEADT ARGVIRAEAG PALERLLALT
HVRICPSVRH PGDLEMARMC LAEELAKLEA RRGARQEIEE AVEDLAGLVD EGLTWRLSQA
AEARHRAERA RLDDSSDLGE DRAALSRSLQ EMIDRQIWVK KRG