| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2046 |
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| Symbol | |
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| ID | 4897654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2168025 |
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| End bp | 2169095 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640112639 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001043921 |
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| Protein GI | 126462807 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.515764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACG CGCTCCGGCT GGGCGCGCGC GGGCTCGGGC GGACCTGGCC CAACCCGGCG
GTGGGCTGTG TCATCGTGAA GGCCGGTCGC GTGGTGGGCC GCGGCTGGAC CCGCCCCGGC
GGGCGTCCCC ATGCCGAGCC GGTGGCGCTG GCCCAGGCCG GCGCGGCGGC GCTGGGCGCC
ACCGCCTACG TCACGCTCGA ACCCTGCTCG CACCATGGCC GGACGCCGCC CTGCGCCGAG
GCGCTGATCG CGGCCGGTCT CGCCCGGGTG GTGACCGCCA CGGGAGATCC GGATCCCCGT
GTCTCGGGAC GGGGTCATGC GATGCTGCGG GAGGCCGGCA TCGCCGTCAC CGAACGGGTG
CTCGAGGCCG AGGCGCGCGC GGCCCATGCG GGCTTCCTGA AGCGCGTGAC CGAAGGGCTG
CCCTTCGTCA CGCTGAAGCT CGCGGCGACC GTCGACGGGC GCATTGCCAC CGCCTCGGGA
GAGAGCCGCT GGATCACCGG CAGCCTCGCG CGCCGGGCGG TTCATGCGAT GCGGATGCGC
CACGATGCGG TGATGGTGGG GGTGGGCACC GCCATCGCGG ACGACCCGGA TCTTTCGGTG
CGCGATCTTG GCTCCGGACA CCAGCCGGTG CGGATCGTGG TGGACAGCCT CCTGCGGCAC
GCGCCCGACA GCCGGCTTGG CCGCACCGCG CGGCAGGTGC CGGTCTGGCT CTGCCATGGG
CCGGCCGCGC CCGAGGCCGC GCGCGCGGCC TGGGCGGCCT CGGGCGCGAT CCTGCTCGAA
TGTCCGGCAG GCCCCGACGG GCTCGAGGCC GAGGCGGTTC TGCGCCGCCT TGCCGCCGAG
GGGCTCACCC GGATCTTCTG CGAGGGCGGG GCCCGGCTTG GCGCCGCACT GGTGCGGGCG
GGGCTCTGCG ACGAGCTCGT CACCTTCACC GCGGGCAAGC TCATCGGCGA GGAAGGGCGC
GGCGCGATGG GCGCGCTGCG CCTCGCCCGG CTGGCCGAAG CGCCGGCCTA CCGGCTGGCC
TCCCTCGACA TGGTGGGGGG GGATCTGCTG GCCCGCTGGC AGAGGCTCTG A
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| Protein sequence | MAHALRLGAR GLGRTWPNPA VGCVIVKAGR VVGRGWTRPG GRPHAEPVAL AQAGAAALGA
TAYVTLEPCS HHGRTPPCAE ALIAAGLARV VTATGDPDPR VSGRGHAMLR EAGIAVTERV
LEAEARAAHA GFLKRVTEGL PFVTLKLAAT VDGRIATASG ESRWITGSLA RRAVHAMRMR
HDAVMVGVGT AIADDPDLSV RDLGSGHQPV RIVVDSLLRH APDSRLGRTA RQVPVWLCHG
PAAPEAARAA WAASGAILLE CPAGPDGLEA EAVLRRLAAE GLTRIFCEGG ARLGAALVRA
GLCDELVTFT AGKLIGEEGR GAMGALRLAR LAEAPAYRLA SLDMVGGDLL ARWQRL
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