Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2013 |
Symbol | |
ID | 4896831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2132839 |
End bp | 2133621 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640112607 |
Product | hypothetical protein |
Protein accession | YP_001043889 |
Protein GI | 126462775 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0102184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCCT ACCAGCACAT CTTTCACGCG GGGAACCTCG CCGACGTGCA CAAGCACGCG CTCCTCTGCG CGATGCTCGA TTACATGGTG CAGAAGGACA AGCCGCTCAC CTACATCGAG ACCCATGCGG GCCGCGGCCT CTACGACCTC GGCTCGGCCG AGGCGGTGAA GACCGGCGAG GCCGCGCAAG GCATCGCCCG GCTCGAGGAG CGGCTGCCGG CAGATCACCC CTACCGGCGG CGCCTGCGCG AGGAGCGCGC GATCTTCGGC CCCGACGCCT ATCCGGGCTC GCCGCTTCTG GCCGCGGGCT TCCTGCGCGA CGGCGATGCG ATGCATCTGG CGGAGCTTCA TCCGCAGGAG TTCCGCGCAC TGGCGAAGGT GATGGAGCCC TGGGGCGCCC ATCTGCGGCA GGAGGACGGG TTCCGCGCCG CGCTGGCGCT GACGCCACCC ACGCCCCGGC GCGGCTTCAT GCTGATCGAC CCGAGCTTCG AGGTGAAGGC GGACTACGAC GCGATCCCGA AGCACATGGC CGCACTCACG CGGAAATGGA ACGTGGGCAC CATCGCGCTC TGGTATCCGC TGCTGCCCTC GGGGCTGCAC CGGCCGATGA TGGCCGCGCT TCGCGACCGG TTCCCCGAGG CGCTCGCCCA CGAGGTGCGC TTTCCGCCCG CCCGCGAGGG ACACGGGCTC GTCGGATCGG GCATGTTCGT GGTGAACCCG CCCTGGGGCA GCGAGGCGGA GGCAGAGCGC CTGACCGCCC TCTTCGCGGG CCTCGCGCGC TGA
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Protein sequence | MLSYQHIFHA GNLADVHKHA LLCAMLDYMV QKDKPLTYIE THAGRGLYDL GSAEAVKTGE AAQGIARLEE RLPADHPYRR RLREERAIFG PDAYPGSPLL AAGFLRDGDA MHLAELHPQE FRALAKVMEP WGAHLRQEDG FRAALALTPP TPRRGFMLID PSFEVKADYD AIPKHMAALT RKWNVGTIAL WYPLLPSGLH RPMMAALRDR FPEALAHEVR FPPAREGHGL VGSGMFVVNP PWGSEAEAER LTALFAGLAR
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