Gene Rsph17029_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2013 
Symbol 
ID4896831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2132839 
End bp2133621 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID640112607 
Producthypothetical protein 
Protein accessionYP_001043889 
Protein GI126462775 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0102184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCT ACCAGCACAT CTTTCACGCG GGGAACCTCG CCGACGTGCA CAAGCACGCG 
CTCCTCTGCG CGATGCTCGA TTACATGGTG CAGAAGGACA AGCCGCTCAC CTACATCGAG
ACCCATGCGG GCCGCGGCCT CTACGACCTC GGCTCGGCCG AGGCGGTGAA GACCGGCGAG
GCCGCGCAAG GCATCGCCCG GCTCGAGGAG CGGCTGCCGG CAGATCACCC CTACCGGCGG
CGCCTGCGCG AGGAGCGCGC GATCTTCGGC CCCGACGCCT ATCCGGGCTC GCCGCTTCTG
GCCGCGGGCT TCCTGCGCGA CGGCGATGCG ATGCATCTGG CGGAGCTTCA TCCGCAGGAG
TTCCGCGCAC TGGCGAAGGT GATGGAGCCC TGGGGCGCCC ATCTGCGGCA GGAGGACGGG
TTCCGCGCCG CGCTGGCGCT GACGCCACCC ACGCCCCGGC GCGGCTTCAT GCTGATCGAC
CCGAGCTTCG AGGTGAAGGC GGACTACGAC GCGATCCCGA AGCACATGGC CGCACTCACG
CGGAAATGGA ACGTGGGCAC CATCGCGCTC TGGTATCCGC TGCTGCCCTC GGGGCTGCAC
CGGCCGATGA TGGCCGCGCT TCGCGACCGG TTCCCCGAGG CGCTCGCCCA CGAGGTGCGC
TTTCCGCCCG CCCGCGAGGG ACACGGGCTC GTCGGATCGG GCATGTTCGT GGTGAACCCG
CCCTGGGGCA GCGAGGCGGA GGCAGAGCGC CTGACCGCCC TCTTCGCGGG CCTCGCGCGC
TGA
 
Protein sequence
MLSYQHIFHA GNLADVHKHA LLCAMLDYMV QKDKPLTYIE THAGRGLYDL GSAEAVKTGE 
AAQGIARLEE RLPADHPYRR RLREERAIFG PDAYPGSPLL AAGFLRDGDA MHLAELHPQE
FRALAKVMEP WGAHLRQEDG FRAALALTPP TPRRGFMLID PSFEVKADYD AIPKHMAALT
RKWNVGTIAL WYPLLPSGLH RPMMAALRDR FPEALAHEVR FPPAREGHGL VGSGMFVVNP
PWGSEAEAER LTALFAGLAR