Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2005 |
Symbol | |
ID | 4896552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2123971 |
End bp | 2125350 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112599 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001043881 |
Protein GI | 126462767 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.233439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCTGT CCGTCTTCGA CATCTTCAAG GTGGGCGTCG GCCCCTCCTC GTCGCACACG ATGGGACCGA TGGTGGCCGC GGGCCGCTTC CTCGACCGGC TCCGGGCGAG CCCGTTCCAT GCGCACGGGC TGCGGGCCTC GCTGCACGGC AGCCTCGCCT TCACCGGCGT GGGCCATGCG ACCGACCGGG CGACGATCCT GGGCCTCGCG GGGTTCGAGC CCGGCAGCTA CGATGCGGAG CGCGCCGAGG ATGTGCTGGC CGCGATCCGC GCCACCGGCC GGATCGAGGC GCCGGGCCTC GGGCCGCTCC AGTTCGACCC CGAGAAGGAT CTGGTCTTCG ACTACGGTCA TGCCCTGCCG GGTCATGCCA ACGGGATGCG CATTCAGGCG ACCGACGCAC AGGGCGACGT GCTGCTGTCG GAGGTCTATT ATTCCGTGGG CGGTGGCTTC GTCCTGACCG AGGCGGAGCT TGCGGAATCG AAATCCGACC GCCCCGCCGC CGGTCCCGCC GTCCCCTTCC CCTTCGAGAG TGCGCATCAG ATGCTCGGCA TGGCCGAGGC CTCGGGCCTG TCCATCGCGG CGATGAAGCG CGCCAACGAA CTCGCGGTCC GCAACGCGCC CGAGCTCGAC CGCGGGCTGA AGCGGATCTG GCAGGTGATG AACGACTGCA TCGAGCGTGG CATGGAGACC GGCGGCACGC TGCCGGGGGG GCTGCATGTC CGCCGCCGCG CCAAGGGCAT CCGCGAGGCG CTGCTGGCCG AACGCGGCCT GAACATGACC GCGCCGCACA CGATCAACGA CTGGATGAGC CTCTATGCCA TGGCGGTGAA CGAGGAGAAT GCCGCTGGCG GCCAGGTGGT CACGGCCCCC ACCAACGGCG CGGCGGGTGT GGTGCCCGCC GTCATCCGCT ACTGGCTCGA CCATGTGCCG GGGGCGAGCC CCGCGAAGCT CGGGGATTTC CTCCTGACGG CCGCGGCCAT CGGCGGGCTC GTCAAGCACA ATGCCTCGAT CTCGGGGGCC GAATGCGGCT GTCAGGCCGA GGTGGGCTCG GCGGCGGCGA TGGGCGCGGC GGGGCTTGCG GCGGTGCTCG GCGGCACGCC CGCTCAGGTC GAGAATGCGG CCGAGATCGC GCTGGAGCAT CACCTCGGCA TGACCTGCGA CCCCGTGCGC GGCCTCGTGC AGGTGCCCTG CATCGAGCGC AACGGGCTCG GCGCGATCAA GGCCGTCTCG GCGGCGAGCC TCGCGCTCCG CGGCGACGGC GAGCATCTGG TGAGCCTCGA CGTCTGTATC GAGACGATGC GCCAGACCGG CCGCGACATG AACGAGAAGT ACAAGGAGAC CTCGCTCGGC GGCCTTGCGG TGAATGTCCC GAACTGCTGA
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Protein sequence | MFLSVFDIFK VGVGPSSSHT MGPMVAAGRF LDRLRASPFH AHGLRASLHG SLAFTGVGHA TDRATILGLA GFEPGSYDAE RAEDVLAAIR ATGRIEAPGL GPLQFDPEKD LVFDYGHALP GHANGMRIQA TDAQGDVLLS EVYYSVGGGF VLTEAELAES KSDRPAAGPA VPFPFESAHQ MLGMAEASGL SIAAMKRANE LAVRNAPELD RGLKRIWQVM NDCIERGMET GGTLPGGLHV RRRAKGIREA LLAERGLNMT APHTINDWMS LYAMAVNEEN AAGGQVVTAP TNGAAGVVPA VIRYWLDHVP GASPAKLGDF LLTAAAIGGL VKHNASISGA ECGCQAEVGS AAAMGAAGLA AVLGGTPAQV ENAAEIALEH HLGMTCDPVR GLVQVPCIER NGLGAIKAVS AASLALRGDG EHLVSLDVCI ETMRQTGRDM NEKYKETSLG GLAVNVPNC
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