| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1999 |
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| Symbol | |
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| ID | 4896200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2117282 |
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| End bp | 2118802 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640112593 |
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| Product | protease Do |
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| Protein accession | YP_001043875 |
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| Protein GI | 126462761 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0697759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGTTGG CCGCTCAGCT ATCTCGAAAG GAGTCGGGTG TGCAGTCTCA CGCCATTACC
ATCGCCCGCC GCATCCACCC GGTGCCCGCG TCGGTCTCGC GTCTCTTCCT CGCGCTGATG
CTCGGGCTCG CCCTGGCGCT GGCGCAGGCC GTGGCTGTCA AGGCGCAGAA CGCTCCCGCA
AGTTTCGCAG GCCTCGCCGA GAAGATCAGC CCGGCCGTCG TGAACATTAC GACCTCGACC
GTCGTGGCGG CACCCACGCA GAATTCGCCC CTCGTGCCCG AAGGCTCGCC CTTCGAGGAT
TTCTTCCGTG ACTTCATGGA CCCGCAGAAC CGCGGCGAGG GCCCGCGCCG CTCCGAGGCG
CTGGGCTCCG GCTTCGTGAT CTCGGAAGAC GGCTACATCG TCACCAACAA CCATGTCATC
GAAGGGGCCG ACGACATTCA GATCGAGTTC TTCTCGGGCA AGAAGCTCGA GGCGAAGCTC
GTCGGCACCG ATCCGAAGAC CGACATCGCG CTGCTGAAGG TCGATGGGAA CCAGCCGCTG
CCCTTCGTGA GCTTCGGCAA CTCGGACCTC GCCCGCGTCG GCGACTGGGT CGTGGCGATG
GGCAACCCGC TGGGGCAGGG CTTCTCGGTC TCGGCCGGCA TCGTGTCGGC GCGCAACCGG
GCCCTCTCCG GCACCTACGA CGATTACATC CAGACCGACG CCGCCATCAA CCGCGGCAAT
TCGGGCGGCC CGCTGTTCAA CATGGACGGG CAGGTGATCG GCGTAAACAC GGCGATCCTG
TCGCCGAACG GCGGCTCGAT CGGCATCGGC TTCTCGATGG CCTCGAACGT GGTGGTGAAG
GTCGTCCAGC AGCTGCGCGA GTTCGGCGAG ACCCGCCGCG GCTGGCTCGG CGTGCGGATC
CAGGACGTGA CCCCCGACGT GGCCGAGGCG ATGGGCCTCA CCGAGGCCAA AGGCGCCCTC
GTGACCGACG TGCCGGAAGG CCCTGCGAAA GAGGCCGGCA TGCAGTCGGG CGACGTGATC
GTGACCTTCG ATAGCGCGCC CGTGGCGGAC ACCCGCGATC TGGTGCGCCG GGTGGCCGAT
GCGCCCATTG GCGAAGCGGT GCGGGTCATC GTGATGCGCG AAGGCAAGAC CCGGACCCTG
TCGGTGACGC TGGGGCGTCG CGAGGAAGCC GAGAACGAAG GCCCCGAGGC ACCCGGCGCG
GCCGAGCCGA CCGAGCCGTC GACGGCCGAT CTTCTGGGCC TGACCGTGGC GCCGCTCACG
GCCGAGCAGG CCGGAGAGCT GGGCCTGCCC GGCGGCACCG AGGGGCTTGC GGTGACGGAC
GTCGATCCGG CCTCAGAGGC CTATTCCAAG GGCTTGCGCG AGGGGGACGT GATCACCGAA
GCCGGCCAGC AGAAAGTGGT CTCGATCAAG GATCTGCAGG ACCGTGTGAC CGAGGCGCGG
GAGGCGGGGC GGAAATCGCT GCTCCTGCTG ATCCGCCGCG GCGGCGATCC GCGTTTCGTG
GCCCTGACGG TCAGCGAGTA G
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| Protein sequence | MQLAAQLSRK ESGVQSHAIT IARRIHPVPA SVSRLFLALM LGLALALAQA VAVKAQNAPA
SFAGLAEKIS PAVVNITTST VVAAPTQNSP LVPEGSPFED FFRDFMDPQN RGEGPRRSEA
LGSGFVISED GYIVTNNHVI EGADDIQIEF FSGKKLEAKL VGTDPKTDIA LLKVDGNQPL
PFVSFGNSDL ARVGDWVVAM GNPLGQGFSV SAGIVSARNR ALSGTYDDYI QTDAAINRGN
SGGPLFNMDG QVIGVNTAIL SPNGGSIGIG FSMASNVVVK VVQQLREFGE TRRGWLGVRI
QDVTPDVAEA MGLTEAKGAL VTDVPEGPAK EAGMQSGDVI VTFDSAPVAD TRDLVRRVAD
APIGEAVRVI VMREGKTRTL SVTLGRREEA ENEGPEAPGA AEPTEPSTAD LLGLTVAPLT
AEQAGELGLP GGTEGLAVTD VDPASEAYSK GLREGDVITE AGQQKVVSIK DLQDRVTEAR
EAGRKSLLLL IRRGGDPRFV ALTVSE
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