Gene Rsph17029_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1993 
Symbol 
ID4897197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2112869 
End bp2113927 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID640112587 
ProductABC transporter related 
Protein accessionYP_001043869 
Protein GI126462755 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.218449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCC TGGAGATCGC CCGGCTGGAG AAATCCTTCG GCCCCCTGCG CGTGGTGCGC 
GACTTCAACC TCTCGGTCGA GCAGGGCGAG TTCATCTCGC TGCTCGGCCC CTCGGGCTGC
GGCAAGACCA CGGTCCTGCG CATGGTGGCG GGTTTCGAGG CGCCCGACTC CGGCGCCATC
CAGATCGAGG GCAAGAACGT CGTCCGCCAG CGCCCGAACG CGCGCAAGAT CGGCATGGTG
TTTCAGGCCT ATGCCCTGTT TCCGAACCTG ACCGTCGCGC AGAACGTGGG CTTCGGCCTC
AGGGTCGCGG GCGTGCCGCG CCGCGAGGCC GAGGAGCGCG TGGCCGAGAT GCTCGCCCTC
ATCGGGCTTC CCGATCTCGG GGCGCGCTAT CCGTTCCAGC TCTCCGGCGG CCAGCAGCAG
CGCGTGGCGC TGGCCCGTGC CCTTGCGGTG CGGCCGCGCG TCCTTCTGCT CGACGAGCCG
CTCTCGGCGC TGGATGCCAA GATCCGGGTG AGCCTGCGCA CCGAGATCCG CACCATCCAG
CAGCGGCTCG GGATCACCAC CATCTTCGTG ACCCACGATC AGGAAGAGGC TTTGTCGATG
TCCGACCGGA TCGTGGTGAT GAACGGCGGC ATCGCCGAAC AGGTCGGCAC GCCCTTCGAG
ATCTACAACC ATCCGACGAC CAAGTTCGTG GCGAATTTCG TGGGCACCAT CAGCACGCTG
GTGGCCGAGG TCGAGGATCC GGCCGGGGGC GCGGTCCGCG TCGCGGGTCA GACCATCCGC
CTGCCCCGGC CGGTCGAGGC CCCGCGCGGC GGCCGCATCG GGCTCGCCCT GCGCCCCGAG
GCACTGCATC TCGGGGCGGG CGACGGGCGC GACACGATGC TGCCCGCCAC CATCGCCGAC
GTGCAGTTCC TCGGCAGCGT GATCCGGCTC CAGCTTCACA CCGGCGGGAC GACGGTCGCG
CTCGACACGT TCAACCGGCC CGACATGCCG CCGCCGCGGG TGGGCGAGCA TACGCAGGTG
AGCTTCGCCG CGCGCGACGT GATCGTGCTG GAACCCTGA
 
Protein sequence
MAFLEIARLE KSFGPLRVVR DFNLSVEQGE FISLLGPSGC GKTTVLRMVA GFEAPDSGAI 
QIEGKNVVRQ RPNARKIGMV FQAYALFPNL TVAQNVGFGL RVAGVPRREA EERVAEMLAL
IGLPDLGARY PFQLSGGQQQ RVALARALAV RPRVLLLDEP LSALDAKIRV SLRTEIRTIQ
QRLGITTIFV THDQEEALSM SDRIVVMNGG IAEQVGTPFE IYNHPTTKFV ANFVGTISTL
VAEVEDPAGG AVRVAGQTIR LPRPVEAPRG GRIGLALRPE ALHLGAGDGR DTMLPATIAD
VQFLGSVIRL QLHTGGTTVA LDTFNRPDMP PPRVGEHTQV SFAARDVIVL EP