Gene Rsph17029_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1991 
Symbol 
ID4896670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2111183 
End bp2112064 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID640112585 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001043867 
Protein GI126462753 
COG category[R] General function prediction only 
COG ID[COG4132] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.235155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC TGCCCCCGCC GAAGGCCGGA CCCCGCGTGT CGCTGCCGCT GAACTGGTTC 
GGCGTGGCCC CGTTCCTGCT GTTCGCGCTC CTGTTCCTGA TCCTGCCCAC GATGCATATC
GTGCTGGGCG CCTTCCGCAC CCCCGCGGGC GATTTCACCC TCGCCAACAT TCGTGGGCTC
TTCACCGCCT CGATCATGAA CGCCTTCTGG ATCTCGATCC GGATCAGCCT GCTCACGGCC
TTCCTCGGCT GCGTGGCGGG CTTCCTGATC GCGGCCGCCG TCACCCGCGG AGGCCTGCCG
GCCCCGCTGC GCGGCGCGCT CCTGACCTTC TCGGGGGTGG CCTCGAACTT CGCGGGCGTG
CCGCTCGCCT TCGCCTTCAT CGCGACGCTG GGCCGGCTCG GGTTCCTCAC CGTGATCCTG
CGCGAGTGGT TCGGCTTCAA CCTCTACGGC ACGGGCTTCA ACCTCATCAG CTTCCTCGGG
CTGACGCTGA CCTACCTCTA TTTCCAGATC CCGCTGATGA TCCTGATCGT CACCCCGGCC
CTCGACGGGC TGAAGCGCGA ATGGAAGGAA GCCGCCGAGA CGCTGGGGGC CACGGGGGCG
CAATACTGGC GCATGGTGGC GCTGCCGGTG CTCTGGCCCT CGTTCCTCGG CACCTTCGCG
CTCCTCTTCG CCAATTCCTT CGGCGCGGTC GCCACGGCGA TGGCGCTGAC CGGCTCGTCG
CTCTCGATCG TGCCGATCAT CCTCTTCGCG CAGATCCGCG GCGACGTGCT GCAGGATCCG
CATCTGGGCT ACGCCATCGC CTTCGGGATG ATCCTGCTCA CGGGGATCGC GAACCTCGTC
TATATCGTGC TGCGCACGCG GGCCGAGAGG TGGGTGAAAT GA
 
Protein sequence
MTDLPPPKAG PRVSLPLNWF GVAPFLLFAL LFLILPTMHI VLGAFRTPAG DFTLANIRGL 
FTASIMNAFW ISIRISLLTA FLGCVAGFLI AAAVTRGGLP APLRGALLTF SGVASNFAGV
PLAFAFIATL GRLGFLTVIL REWFGFNLYG TGFNLISFLG LTLTYLYFQI PLMILIVTPA
LDGLKREWKE AAETLGATGA QYWRMVALPV LWPSFLGTFA LLFANSFGAV ATAMALTGSS
LSIVPIILFA QIRGDVLQDP HLGYAIAFGM ILLTGIANLV YIVLRTRAER WVK