| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1980 |
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| Symbol | |
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| ID | 4895629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2097605 |
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| End bp | 2099944 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640112574 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001043856 |
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| Protein GI | 126462742 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.230064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGGGG TCGTTTCCGC GACCGACCGC GGCAATTTCC ATGCAAGCCC CACCACCGCC
ACGGTGCTCG ACATCATCGG CCGCATCCTG CGCGCCCCGC TCTCTGCCAA CGACACCGAG
ATCGAGAGCG CCCTCGCGCA GGTGGCGGAC GCCTGCAGCG CGGATGTGGC GCAGGTCTGC
CGTGCGGGGA CCACGGGCCC TCTCGAGCCG ATCCACAGCT GGGTGCGTGA CGGCCATATC
GTCTTGAACA TCCAAGACTT GTGCAAATTC TGCCCGGGGA CGGACCAGAC CGGGCCGGTC
ATGCTGCGCG ACCTGAAGGA CCTTCCCGAG GGGCCGGCCC GCGATCGGCT CGCGGGGATG
GAGTTGCGGT CGCTCGTCGC GGTGCCGATG CTGCGGCACG GGGTGCTGGC GGGCCGGGTG
CTTCTGGGCT GGCAGACGGC GAGCAGCGAC CTGCGCCCCG AGGATCTGGC CGCGCTGCAG
TCCCTCGCCG AGGCCATGCA TGCGGCCGCG GAGCGACGCG AAAGCGAGCG GCTCACGACG
GAGGCGGCAG CAGCGCTGCA GGAGGACCGG CTTCTTCTCG AATCGATCCT GCGGACCAGC
ACCTCGGCCA TCCTCGCCTT CGATGCCGAT GCCCGCATCG TCTTCGCCAA CGACGAGGCA
GCGGCCCTCC TCGGAACGGA CGCGAACCGT CTGCCGGGAT GCACCCTCGA GGGCGTGGGC
TGCCGCCTTC TGTCGCGCGA GGGCGAGCCC CTCCCGCCCG AGGCCCTGCC GGTCGCGCGC
GCCATTGCCG AGGGGCAGAC GCTCCGCGAC CTGCACCATG TGCTGATGGC CGCCGACGGC
CGACAGAGGA TCCTGTCGAT CAACGCGGCC CCAGTGGCGG CCGGCGCAGC GACAGCGGTG
CGCGTCGTCG CCACCATCGA CGACGTGACC GGGCAGGTCT CGGCCGACAG CGCGCTGCGC
ACGGCACTCG CCGAAGCGCA TCAGCTCGCC TTCTTCGACC CTCTGACGGG GCTTTACAAC
CGCCGGGGCA TCGTCGAGGT GCTGCGCGAC TGCCTCCAGA CCTGCGCCCG CGAGAAGGCC
TTCCTCTCGC TTCTCTACAT CGATCTGGAC GGAATGCGGC AGGTGAACGG CACCCGCGGG
CACTGGCTGG GCGACCGGGT CCTGCAGGCG CTGGGCGCGC GGCTGGACAA CCTGCGGCAG
GACGGCGGCG ACCTCGGCCG GATCTCGGCC GACGAATTCG TGCTGACCTG CGGCGAGACC
CATCCCGACG CTGCCGGCGC CGTCGCCGCC GCCGAGGCCG AGGCCGAGCG CATCCTCGAG
TCGCTGCGGG AGCCGTTCGT GGTGGATGGT CTCACGCTCG AGGTCACCGC CTCGATCGGC
CTTGCCGCCA TTTCGGCCGA GGATTCGGTC GAGGGGCTGC TGAAGGGCGT CGATCTGGCC
GTCATGGCCG CCAAGGCCGC GGGCGGCGAC AGGGCCTGTG CCTACCGGGC CGACATGGAG
CAGGACATGG TGGGCCGCGT GGCCCTTGCG CAGGAGCTGC GCGAGGCGAT CCGCCGCGAC
GAGTTCCGCA TCTACTTCGA ACCGATGGTC AGCCTCGGCG AGACAGGGCT CGAGATCGTG
GGTCAGGAGG CGCTGATCCG CTGGGAGCAT CCGCAGCGCG GGCTGCTGGC GCCCATCGCC
TTCATCCCCT TCGCCGAGGA GACCGGCTTC ATCCGCGACA TCGACCGCTG GGTGCTGCGC
GCGGCGGCAC AGGAGCTCGC CCGCTGGGCC GAGGATCCCG CGCGCCGCCA TCTCGGGGTC
TCGATCAACA TCAGCTCGGC GCAGTTCCTG TCCGAGGAGT TCGGCCAGAT GGTGCGCGAG
GTGCTGGACG AGACCGGCGT CGATCCCACC CGGATCGAGC TGGAAGTCAC CGAGGGCACG
CTCCTGTCCA ATCTCGGCCT CGCGCGGACC ACGATGATGG ACCTGCGCTC GCTCGGCATC
TCCATCGCGC TGGACGATTT CGGCACCGGC TTCTCCTCGC TCAGCTATCT GCGGGACCTG
CCCGTGGACG TGTTGAAGAT CGACCGCAGC TTCTTGGGCG GCCTGTCGGA CTCGAAGGCG
AACCGGACCA TCCTCGAAGG GATCATCGGA CTTGCCTCGG GGCTCGGCGT GGCGCTGGTG
GCCGAGGGGG TGGAGACGCC GGCGCAGTTC GCCTGGCTGC GGGCCAAGGG ATGCCGGACC
TTCCAGGGCT ACCTCTTCGG CCGCCCGGCC GATGAGGCGC AGACGCAGCT CGCGCCCGAG
GTGTCCGCGC TCGGCGGCCA TGGCGGCGAC CGTGCGGTTC TGGGCCAGAT CAAGGGCTGA
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| Protein sequence | MPGVVSATDR GNFHASPTTA TVLDIIGRIL RAPLSANDTE IESALAQVAD ACSADVAQVC
RAGTTGPLEP IHSWVRDGHI VLNIQDLCKF CPGTDQTGPV MLRDLKDLPE GPARDRLAGM
ELRSLVAVPM LRHGVLAGRV LLGWQTASSD LRPEDLAALQ SLAEAMHAAA ERRESERLTT
EAAAALQEDR LLLESILRTS TSAILAFDAD ARIVFANDEA AALLGTDANR LPGCTLEGVG
CRLLSREGEP LPPEALPVAR AIAEGQTLRD LHHVLMAADG RQRILSINAA PVAAGAATAV
RVVATIDDVT GQVSADSALR TALAEAHQLA FFDPLTGLYN RRGIVEVLRD CLQTCAREKA
FLSLLYIDLD GMRQVNGTRG HWLGDRVLQA LGARLDNLRQ DGGDLGRISA DEFVLTCGET
HPDAAGAVAA AEAEAERILE SLREPFVVDG LTLEVTASIG LAAISAEDSV EGLLKGVDLA
VMAAKAAGGD RACAYRADME QDMVGRVALA QELREAIRRD EFRIYFEPMV SLGETGLEIV
GQEALIRWEH PQRGLLAPIA FIPFAEETGF IRDIDRWVLR AAAQELARWA EDPARRHLGV
SINISSAQFL SEEFGQMVRE VLDETGVDPT RIELEVTEGT LLSNLGLART TMMDLRSLGI
SIALDDFGTG FSSLSYLRDL PVDVLKIDRS FLGGLSDSKA NRTILEGIIG LASGLGVALV
AEGVETPAQF AWLRAKGCRT FQGYLFGRPA DEAQTQLAPE VSALGGHGGD RAVLGQIKG
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