Gene Rsph17029_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1942 
Symbol 
ID4895145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2059274 
End bp2060017 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID640112536 
ProductABC transporter related 
Protein accessionYP_001043818 
Protein GI126462704 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID[TIGR03411] urea ABC transporter, ATP-binding protein UrtD 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TCCTCGAGGT CTCGGGCGTC TCCGTCACCT TCGACGGCTT CCGCGCGATC 
AACAACCTCT CCTTCAACAT CGGCGCGCGC GAGCTGCGGG CCATCATCGG GCCCAACGGC
GCGGGCAAGA CCACCTTCAT GGATATCGTG ACCGGCAAGA CCCGCCCCGA TCAGGGGTCC
GTCACCTTCG GCGACCGCTC GATCTCGCTC TTGAAGCTCT CCGAGGCCCG GATCGCGCAG
GCGGGTATCG GGCGCAAGTT CCAGCGCCCG ACGGTGTTCG AGGACCAGAC GGTGTTCGAC
AATCTCATGA TGGCGCTGAA GAAGCCGCGC TCGCCCTTCG CCGTCCTCTT CTTCCGGCCG
ACGCGGCCCG ATGCTGCGCG CGTGCAGGCG CTGGCCGAGG AGGTGGGCCT CGGCCAGCAT
CTCGCGCGGA AGTCGGGCGA ACTCAGCCAC GGGCAGAAGC AGTGGCTCGA GATCGGGATG
CTGCTCGCGC AGGAGCCGCG GCTCCTCCTC GTGGACGAGC CCGCGGCGGG GATGACGCTG
GCCGAGCGCG AACATACCAC TGCGCTTCTC GTCGAGATGG CGAAGACGCG CGCGGTGGTG
GTGGTCGAGC ATGACATGGA GTTCGTCCGC CGCCTCGACT GCAAGGTGAC GGTGCTGCAC
GAGGGGGCGG TGCTGGCCGA GGGCAGCCTC GACCATGTGA CGCGGAACCC TGCGGTGATC
GAAGTCTATC TGGGACGCGG ATGA
 
Protein sequence
MSALLEVSGV SVTFDGFRAI NNLSFNIGAR ELRAIIGPNG AGKTTFMDIV TGKTRPDQGS 
VTFGDRSISL LKLSEARIAQ AGIGRKFQRP TVFEDQTVFD NLMMALKKPR SPFAVLFFRP
TRPDAARVQA LAEEVGLGQH LARKSGELSH GQKQWLEIGM LLAQEPRLLL VDEPAAGMTL
AEREHTTALL VEMAKTRAVV VVEHDMEFVR RLDCKVTVLH EGAVLAEGSL DHVTRNPAVI
EVYLGRG