| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1913 |
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| Symbol | |
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| ID | 4897516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2026044 |
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| End bp | 2027111 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640112507 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001043789 |
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| Protein GI | 126462675 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.565057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCT CTGCCGATCT CGATGCCTGC CGGGAGATGA TCCGCACCGG CTCCTATTCG
TTCCATGCCG CCTCCCGCCT GCTGCCCGAG CGCGTGCGCG CGCCGTCGCT CGCGCTCTAT
GCCTTCTGCC GCGTGGCCGA CGATGCGGTC GACGAGGCGG TGAACGATGG ACAGCGCGAG
GAGGATGCCG AGGTCAAGCG CCGCGCCGTC CTGAGCCTGC GCGACCGGCT GGACCTCGTC
TATGGCGGCC GCCCGCGCAA TGCGCCGGCC GACCGCGCCT TCGCCGCGGT GGTCGAGGAG
TTCGAGATGC CCCGGGCGCT GCCCGAGGCG CTGCTCGAGG GGCTCGCCTG GGACGCGGTG
GGGCGGAGCT ACGACAGTTT CTCGGGCGTG CTCGACTATT CGGCGCGGGT GGCCGCGGCG
GTGGGGGCGA TGATGTGCGT CCTCATGCGC GTGCGCGATC CCGACGTGCT CGCCCGGGCC
TGCGATCTGG GCCTCGCCAT GCAGCTCACC AACATCGCCC GCGACGTGGG CACCGACGCG
CGCTCGGGGC GGATCTATCT GCCGCGCGAC TGGATGGAGG AGGAGGGGCT GCCGGTCGAG
GAGTTCCTCG CCCGGCCGGT GGTCGACGAC CGCATCCGCG CGGTGACGCG CCGCCTGCTG
CGCGCGGCCG ACCGGCTCTA TCTGCGTTCG GAAGCGGGGG TCTGCGGCCT GCCTCTGGCC
TGCCGGCCCG GCATCTATGC CGCGCGCCAC ATCTATGCGG GTATCGGCGA CGAGATCGCG
CGGAACGGCT ATGACAGCGT GACGCGCCGC GCCTTCACCA CGCGGCGCCA GAAGCTCGTC
TGGCTCGGGC TCTCGGCCAC ACGTGCGGCC CTCAGCCCGT TCGGCCCCGG ATGCGCCACG
CTGCATGCGG CGCCCGAGCC CGAAGTGGCC TTCCTCGTCA ATGCCGCCGC CCGGGCCCGG
CCGCAGCGCG GCCGCTCCGA GGCGCTGATC TCGGTTCTGG CCCAGCTCGA GGCGCAGGAT
CGGCAGATCT CGCGGCAGCG ACTGGGGAAC CGGGCCAACC CGATCTAG
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| Protein sequence | MIASADLDAC REMIRTGSYS FHAASRLLPE RVRAPSLALY AFCRVADDAV DEAVNDGQRE
EDAEVKRRAV LSLRDRLDLV YGGRPRNAPA DRAFAAVVEE FEMPRALPEA LLEGLAWDAV
GRSYDSFSGV LDYSARVAAA VGAMMCVLMR VRDPDVLARA CDLGLAMQLT NIARDVGTDA
RSGRIYLPRD WMEEEGLPVE EFLARPVVDD RIRAVTRRLL RAADRLYLRS EAGVCGLPLA
CRPGIYAARH IYAGIGDEIA RNGYDSVTRR AFTTRRQKLV WLGLSATRAA LSPFGPGCAT
LHAAPEPEVA FLVNAAARAR PQRGRSEALI SVLAQLEAQD RQISRQRLGN RANPI
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