| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1894 |
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| Symbol | |
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| ID | 4897469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2006963 |
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| End bp | 2008363 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640112488 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001043770 |
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| Protein GI | 126462656 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.170185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.445756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGA TCAGACTGTG GGCCGTGGCG ACCTGCTCGG CTCTGGCGGT GATGGCCTCG
TCCGCGGCAC AGGCGGAGAC GCTCGCCGAC GCCCTCATCT CCGCCTACCG CAACAGCAAC
CTGCTCGAAC AGAATCGCGC GCTTCTGCGG GCGACCGACG AGGATGTGGC GGTGGCCGTC
GCGGCTCTGC GCCCCGTCGT GCAGTTCGTC GCGCAATCGA CCTACAGCTT CCAGCGGGTT
CATGCGGATG CGACGCTCCT GACCCCTGCC GGGCGGACCA ATGTCGAGAA CCTGAACTCC
TCGGTCGGGC TCACCGCCTC GATGACGCTC TATGACTTCG GGCGCAATGC GCTCGCCGTC
GAGGCCGCCA AGGAGACGGT GCTCGCCACC CGCGAGGCGC TGGTGCAGGT CGAGCAGAAC
GTGCTGCTCG ATGCGGTCAA TGCCTATGTG CAGGTGCAGC TTGCGCAATC CATCGTCAAT
CTGCGGCGCA ACAACCTCGG GCTGATCGAT CAGGAACTGC AGGCGGCGCA GGACCGGTTC
GACGTGGGCG AAGTCACCCG CACCGACGTG TCGCAGGCGC AGGCCGCGCT GGCGGCCTCG
CGGTCCGACC TGACCTCGGC CGAGGGCGAT CTCAAGGTGG CGCGCGAGGC CTACAAGGCC
GCCGTGGGCC ATTATCCGGT CGATCTCGCG CCGCGTCCTG CCGCGCCGCG CACCGCCGCG
ACCATGGAGG CGGCGCGTCA GGTGGCGCTC CGCGCCCATC CGCAGGTGCG CCAGGCCCAG
CGTCAGGTGG CGGCGGCCGA CCTGAACGTG GCGCGCGCCA AGGCCGCGAT GCGGCCTTCG
ATCAGCGCCG AGGCGAATGT GGGGCTCGAC GACGAGGGGC AGGAGTCGGC CAGCGTCGGC
CTCTCGCTCC GGCACACGCT TTATGCCGGG GGCGAGCTGT CCGCGCTTTA CCGCCAGACG
CTTGCCAACC GCGATGCGCA GAAGGCGAAC CTGCTGCAGA CCGGCGTGAA TGTGGCGCAG
AATGTGGGCG TCGCCTGGTC GACGGTCGAG GTGGCCTCCG CCGCCATCGC CGCGGGGGAC
GAGGAAGTCC GCGCTGCCCG CACCGCCTTC GAGGGCGTGC GCGAGGAAGC GACGCTCGGT
GCCCGGACCA CGCTCGACGT GCTGAACGCC GAGCAGGACC TCCTGAACTC GCAGGCCGAC
CGTCTCACCG CCGAGGCGCA GCGCTATGTC GGGATCTATC AGGTGCTGGC CTCGATGGGG
CTCCTGACCG TCGAACATCT CAATCTGGGT ATCCCGACCT ACGATCCGGC AGCCTACTAC
AACGCCGTGA AGCACGCGCC GGCCACCAGC TCGCAGGGCA AGCGGCTCGA CCGCGTGCTG
AAGTCGATCG GCCGGAACTG A
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| Protein sequence | MRKIRLWAVA TCSALAVMAS SAAQAETLAD ALISAYRNSN LLEQNRALLR ATDEDVAVAV
AALRPVVQFV AQSTYSFQRV HADATLLTPA GRTNVENLNS SVGLTASMTL YDFGRNALAV
EAAKETVLAT REALVQVEQN VLLDAVNAYV QVQLAQSIVN LRRNNLGLID QELQAAQDRF
DVGEVTRTDV SQAQAALAAS RSDLTSAEGD LKVAREAYKA AVGHYPVDLA PRPAAPRTAA
TMEAARQVAL RAHPQVRQAQ RQVAAADLNV ARAKAAMRPS ISAEANVGLD DEGQESASVG
LSLRHTLYAG GELSALYRQT LANRDAQKAN LLQTGVNVAQ NVGVAWSTVE VASAAIAAGD
EEVRAARTAF EGVREEATLG ARTTLDVLNA EQDLLNSQAD RLTAEAQRYV GIYQVLASMG
LLTVEHLNLG IPTYDPAAYY NAVKHAPATS SQGKRLDRVL KSIGRN
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