Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1890 |
Symbol | |
ID | 4896688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2003686 |
End bp | 2004453 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112484 |
Product | glycine cleavage T protein (aminomethyl transferase) |
Protein accession | YP_001043766 |
Protein GI | 126462652 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.728255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.596808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGGTG AGATCGCAAC CGACCGCAGG CTCTGGGAGA TCTCGGGCAA GGACGGCCTG CATTTCCTGC AGGGACTCGT CTCGAACGAC GTCCGACCGC TCGAGACCGC CGACGGGATC GTCTGGGCCG CGCTCCTCTC GCCGCAGGGG AAGTATCTGG CGGACTTCTT CGTGGTTCGG ACGGGCGGGC GGCTCTTCAT CGACATCTCG GACCGGCTGG CCGATCCTAC GCTGAAGCGG CTCACCATGT ATCGCCTGCG CGCCGACGTG CAGATCGCGC CGCTCGACCT GTCGGTCGTG CGCGGCCTCG GCGAGGCCCC CGCGGGCGCC CTGCCCGACC CGCGCCACCC GGCCCTCGGC TGGCGCGGCT ACGGGATGGA CGGGGGCGCC CCCGAAGTGG ACTGGGACGC GATCCGCGTG GCCCATCTCA TTCCGGAGAG CGGGCTCGAG CTGGTCCCCG ATGACAGCTA CCTGCTCGAA TCGGGGTTCG AGCGGCTGCA CGGCGTGGAT TTCCGCAAGG GCTGCTATGT GGGTCAGGAA GTGACCGCGC GCATGAAGCA CAAGACCGAG CTGCGGAAGG GTCTGGTGCG GGTGCGCATC TCGGGCGAGG CGGCGTTCGG CGCCGAGATC ACGGCAGACG GCAAGCCCGC GGGCACGCTC TTCACCCGCT CGGGCGACCG CGCCATCGCC TATGTCCGCC ACGACCGCGC CGAGGGCGAG ATGCGCGCGG GCGAGGCTGC CCTGCATCTG GATCCCCTCG CGGAGTGA
|
Protein sequence | MPGEIATDRR LWEISGKDGL HFLQGLVSND VRPLETADGI VWAALLSPQG KYLADFFVVR TGGRLFIDIS DRLADPTLKR LTMYRLRADV QIAPLDLSVV RGLGEAPAGA LPDPRHPALG WRGYGMDGGA PEVDWDAIRV AHLIPESGLE LVPDDSYLLE SGFERLHGVD FRKGCYVGQE VTARMKHKTE LRKGLVRVRI SGEAAFGAEI TADGKPAGTL FTRSGDRAIA YVRHDRAEGE MRAGEAALHL DPLAE
|
| |