Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1889 |
Symbol | |
ID | 4896305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2001924 |
End bp | 2003696 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112483 |
Product | ABC transporter related |
Protein accession | YP_001043765 |
Protein GI | 126462651 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.19709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.932579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCCGCA CACCCGCCGA TCCGCGCTAC AGCTCCGGCC GCCTGTTCGG CCGGCTCTGG CACGGCTATC TCAAGCGCCA CACGGGCACG ATGGGCTTGG CCTTCCTGCT CAACGTGATC GAGGGCTCGA CGCTCGGCGC GCTCTCCTGG CTGATCCAGC CGCTCTTCGA CCGCGTCTTC GCCCCGGGCG GCAACAACCT GCTGCCGTGG GTGGGCCTGG CGATCCTCGG CCTCTTCGTG CTGCGCGCGA TCACCTCGGT GGCCTCCAAG GCCATTCTCA CGCGGGTCTC GCAGATCAGC TCGACCGCGA TGCAGGTCGA TCTGCTCCGC CACATCCTGA CCCTCGATCA GGGCTTCTTC CAGAAGAACC CGCCCGGCGC GCTGATGGAG CGGGTGCAGG GCGACACGAA CGCCGTGCAG GGCGTCTGGT CGAGCGTGAT CCTCGGCATG GGGCGCGACG TGGTCTCGCT GATCGGCCTC TTTGCCGTGG CGGTTTCCAT CGATCCGATC TGGACACTGG CCGCGCTGGT GGGGGCGCCG CTCCTGATCC TGCCCGCACT GGTCGTGCAG CGCTACATCC GCAAGAAGAC GCGCCAGATG CGGGTGCAGG CCGGAGCGCG CTCCACCCGG CTCGACGAGA TCTTCCACGG CATCCAGCCG ATCAAGCTGA ACCGGATGGA GACCTACCAG CTCGACCGGT TCCGGCGGAT CGTCGATGTG ATCGTGCGGG GCCAGCTCAA GATGGCGGTG GGGCGCGCCA CCATGCCCGC GCTGATCGAC GTCATCACCG GGATCGGCTT CTTCGCCGTC CTCGTCCTCG GCGGGCGCGA GATCGCCTCG GGCGAGCGGA CGACAGGCGA GTTCATGTCC TTCTTCACTG CCATGGCCCT CACCTTCCAG CCGCTCCGGC GTCTGGGCGA CCTGTCGGGC TTCTGGCAGA TCGCGGCCGC CAGTCTCGAG CGGATCTACC GGCTCTTCGA CACCGAACCC CAGGTGCTGC GCCGCCCGGC CACGGCCACG CCCAGGCCGG GCGTTCCCGA GATCCTGATC GAGGACGTGC ATTTCGCCTA CGACGATCAT CCGGTGCTGA ACGGCCTCAG CTTCCGGGCC GCGCCGGGCA GGATGACCGC CCTCGTGGGC CCGTCGGGCG CAGGCAAGAG CACGGTCTTC CATCTGCTCA CGGGCCTCAT CGAGCCCCGG TCGGGGCGCG TGCTCCTCAA CGGGGTCGAC GCGGCAGACA TGGCGCTTTC GGACCTGCGG GCCCAGTTTG CCGTCGTCTC GCAGGAGGCG GGCCTCTTCG ACGAGACGAT CCGCGAGAAC GTGACCCTCG GCCGCGACGT GCCGCAGGAC CGGCTCCGGG CGGCGCTCGA GGCCGCGCAT GTGACGGAGT TCGTCGATGG CCTGCCCGAG GGCGATCTGA CGCCCGCGGG GCCGCGCGGC TCGCGTCTGT CTGGCGGCCA GCGCCAACGG GTGGCCATCG CGCGGGCCCT CGTGTCGGAG GCGCCGGTAC TGCTTCTCGA CGAGGCCACC TCGGCGCTCG ACGCGGCCTC CGAGGCGCTG GTGGCCGAGG CGCTGAGCCG GCTTGGCGAG GGCCGCACGA CGCTGGTCAT CGCCCACCGG CTCTCGACCG TGCGGCAGGC CGACCGGATC GTGGTCATGG AAGAGGGCCG CGTCGTCGAT CAGGGCACGC ACGAGGAATT GCTGGCGCGG GGCGGTCTCT ATGCCGAACT GCACCGGCTG CAGTTCAGGA ACGGAGAGAC CCATGCCGGG TGA
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Protein sequence | MPRTPADPRY SSGRLFGRLW HGYLKRHTGT MGLAFLLNVI EGSTLGALSW LIQPLFDRVF APGGNNLLPW VGLAILGLFV LRAITSVASK AILTRVSQIS STAMQVDLLR HILTLDQGFF QKNPPGALME RVQGDTNAVQ GVWSSVILGM GRDVVSLIGL FAVAVSIDPI WTLAALVGAP LLILPALVVQ RYIRKKTRQM RVQAGARSTR LDEIFHGIQP IKLNRMETYQ LDRFRRIVDV IVRGQLKMAV GRATMPALID VITGIGFFAV LVLGGREIAS GERTTGEFMS FFTAMALTFQ PLRRLGDLSG FWQIAAASLE RIYRLFDTEP QVLRRPATAT PRPGVPEILI EDVHFAYDDH PVLNGLSFRA APGRMTALVG PSGAGKSTVF HLLTGLIEPR SGRVLLNGVD AADMALSDLR AQFAVVSQEA GLFDETIREN VTLGRDVPQD RLRAALEAAH VTEFVDGLPE GDLTPAGPRG SRLSGGQRQR VAIARALVSE APVLLLDEAT SALDAASEAL VAEALSRLGE GRTTLVIAHR LSTVRQADRI VVMEEGRVVD QGTHEELLAR GGLYAELHRL QFRNGETHAG
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