| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1872 |
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| Symbol | |
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| ID | 4895193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1980787 |
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| End bp | 1982382 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640112466 |
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| Product | serralysin |
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| Protein accession | YP_001043748 |
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| Protein GI | 126462634 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.043105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTTT CCTCGCTTTT CCCCACTTTC GCCGGGCAAG GGCCCGAAAC CGCACTGACG
GACCGCGACG GACGCGCCGA GGCCGCTGCC TTCCAGACGA CCGCGGCGAA CAGGCTCGCT
GCCGAACCGG CGGTGGCCTC GATGCGCGAG ATCGCCGATC AGCTCGTCAG CGGCTATTGG
CGGTCGGAGG GCCACTCCAT CCGCCGCTTC GACGTGGAGC CGGGAGACAC GCTGAACGTG
AACCTGTCTG GTCTGACGGC CGATGGCCAG CGTCTCGCGC GGGCCGCGCT GGACACCTGG
GCGGATGTCA CGGGGCTGAA GTTCAATACG GCCCCCCGCT TCGGCGCGAC GGTTCATATC
GTGATCGACG ACAGGGAGAA CGGGGCTCAC TCCACGGCCA CCCTGTCGGG CGGACGGCTG
ATCAAGGCAA ATGTGAATGT CGGCCGCGAC TGGCTCGCGG ACTACGGCAC CGACCTGAAC
AGCTACAGCC TGCAGACCTT CATCCACGAA ATCGGCCATG CGCTGGGTCT CGGCCATGCC
GGCAACTACA ACGGCTCGGC CGATTATGCG AGCGACGCGC TCTTTCTGAA CGATAGCTGG
CAGGCCAGCG TCATGTCCTA TTTCAGTCAG ACCGAGAACA GCTACATCGA CGCCGACAAG
GCGTTCGTCG TGACGCCGAT GATCGCCGAC ATTCTGGCGA TCCAGACGCT CTACGGCACG
CCGGGCGGGC TGCGGGCAGA CAGCACGGTC TATGGCACGG GCTCGACGGC GGGCGGCATG
TATGACCGCG CGGCGACCTT GACCGCGGAA CCCGTGGCCT GGACGATCTT CGACCAGGGC
GGGTGGGACA GGCTCGACCT GCGCGGGGCA GAGGCTCCGC AACTCATCGA CCTGCGGCCG
GGCGCAATTT CGGACATCTA TGGCGCGAAG GGCAATCTCT CGATCGCCCC GGGCACGGTG
ATCGAGGCCG CGCGGGGCGG CAGCGGCAAC GACCGGCTCA TCGGCAACGG CGTGGCCAAC
GTCCTGAACG GCGGCGGGGG CTCGGACATC ATGCGCGGCG GGGCGGGCAA CGACATCTAC
CACAGCGACG GCCTCGACCG GATCGTGGAG CTTCCGGGGC AGGGGATCGA CCGGGTGATC
TCGACGGCGA GCTGCACCCT TGCGGCCAAT GTGGAGAACC TGACGCTGGC GGGCGGACGG
GCCATCACCG GCACGGGCAA CGGGCTTGCG AACGTCATCA CGGGCAATGC GGCGGCCAAC
CGCCTGACCG GCGGGGCCGG TGCCGACAGC TTCGTCTTCG CGACCGCGCT CGGCCGCGGC
AACGTCGACA GGATCACGGA TTTCTCGGTG GCCGACGACA CGATCCGCCT CGACGACGCC
ATCTTCCGGG CGCTGCCGCG GGGCAGTCTG GCCGACGCGG CATTCGCGGC CAATGCGGCG
GGGCGGGCGC TCGACGCGCT CGACCGCATC CTCTACGAGA CCGACACGGG CGCGCTCTGG
TATGACCGCG ACGGGACGGG TGCCGCGGCC GCCGTGCGCT TCGCTTGGGT GACGCCAGAG
CTTGCGCTGA CCGCCGCCGA TTTCCTCGTG ATCTGA
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| Protein sequence | MFLSSLFPTF AGQGPETALT DRDGRAEAAA FQTTAANRLA AEPAVASMRE IADQLVSGYW
RSEGHSIRRF DVEPGDTLNV NLSGLTADGQ RLARAALDTW ADVTGLKFNT APRFGATVHI
VIDDRENGAH STATLSGGRL IKANVNVGRD WLADYGTDLN SYSLQTFIHE IGHALGLGHA
GNYNGSADYA SDALFLNDSW QASVMSYFSQ TENSYIDADK AFVVTPMIAD ILAIQTLYGT
PGGLRADSTV YGTGSTAGGM YDRAATLTAE PVAWTIFDQG GWDRLDLRGA EAPQLIDLRP
GAISDIYGAK GNLSIAPGTV IEAARGGSGN DRLIGNGVAN VLNGGGGSDI MRGGAGNDIY
HSDGLDRIVE LPGQGIDRVI STASCTLAAN VENLTLAGGR AITGTGNGLA NVITGNAAAN
RLTGGAGADS FVFATALGRG NVDRITDFSV ADDTIRLDDA IFRALPRGSL ADAAFAANAA
GRALDALDRI LYETDTGALW YDRDGTGAAA AVRFAWVTPE LALTAADFLV I
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