| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1829 |
|---|
| Symbol | clpX |
|---|
| ID | 4896905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1927275 |
|---|
| End bp | 1928540 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640112423 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_001043708 |
|---|
| Protein GI | 126462594 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.517377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.735095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACA ATACTGGCAG CGACAGCAAG AACACTCTCT ACTGCTCTTT CTGCGGCAAG
AGCCAGCATG AGGTGCGCAA GCTGATCGCA GGGCCGACCG TGTTCATCTG CGATGAGTGC
GTCGAGCTCT GCATGGACAT CATCCGCGAA GAGACGAAAT CGACCGGCCT GAAGTCGGCC
GACGGCGTTC CGACCCCGCG CGAGATCTGC AAGGTGCTCG ATGATTACGT CATCGGGCAG
ATGCACGCCA AGCGCGTGCT GTCGGTCGCG GTGCACAACC ACTACAAGCG GCTCAATCAC
AGTTCCAAGA CCGACATCGA ACTCTCGAAG TCGAACATCC TGCTGATCGG CCCCACGGGC
TGCGGCAAGA CGCTGCTCGC GCAGACGCTT GCCCGCATCC TCGACGTGCC CTTCACCATG
GCGGATGCGA CCACGCTGAC CGAAGCGGGC TATGTCGGCG AGGATGTCGA GAACATCATC
CTGAAGCTGC TTCAGGCCTC GGAATACAAC GTCGAGCGGG CGCAGCGCGG CATCGTCTAT
ATCGACGAGG TCGACAAGAT CACCCGCAAG TCCGACAATC CCTCGATCAC GCGCGACGTG
TCCGGCGAGG GGGTGCAGCA GGCGCTGCTG AAGATCATGG AAGGCACCGT GGCGAGCGTT
CCCCCGCAGG GCGGGCGCAA GCATCCGCAA CAGGAATTCC TGCAGGTGGA CACGACGAAT
ATCCTGTTCA TCTGCGGCGG CGCCTTCGCG GGACTGGAAA AGATCATCGC GCAGCGCGGC
AAGGGCTCGG GCATCGGCTT CGGCGCCGAG GTCAAGGACC CGGATGCCCG CGGCGTGGGC
GAGCTCTTCA AGGAGCTCGA GCCCGAGGAT CTGCTGAAGT TCGGCCTGAT CCCCGAATTC
GTCGGCCGTC TGCCCGTGAT CGCGACCCTG ACCGACCTCG ACGAGGCGGC GCTGGTGACG
ATCCTGACCG AGCCGAAGAA TGCACTGGTG AAGCAGTATC AGCGGCTGTT CGAGATCGAG
GGCGTGAAGC TCACCTTCAC CGCCGACGCG CTGACCGCCA TCGCCAAGCG CGCGATCAAG
CGCAAGACCG GCGCCCGCGG CCTCCGCTCG ATCATGGAAG ACATCCTGCT CGACACGATG
TTCGAGCTTC CGGGCCTCGA GGGCGTGGAA GAGGTCGTCG TGAACGAGGA AGCGGTGAAC
TCCGGCGCGA AGCCGCTCCT GATCTACACC GAGGTCACGA AGAAGAAGGA CGCGACCGCC
AGCTGA
|
|---|
| Protein sequence | MANNTGSDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ETKSTGLKSA
DGVPTPREIC KVLDDYVIGQ MHAKRVLSVA VHNHYKRLNH SSKTDIELSK SNILLIGPTG
CGKTLLAQTL ARILDVPFTM ADATTLTEAG YVGEDVENII LKLLQASEYN VERAQRGIVY
IDEVDKITRK SDNPSITRDV SGEGVQQALL KIMEGTVASV PPQGGRKHPQ QEFLQVDTTN
ILFICGGAFA GLEKIIAQRG KGSGIGFGAE VKDPDARGVG ELFKELEPED LLKFGLIPEF
VGRLPVIATL TDLDEAALVT ILTEPKNALV KQYQRLFEIE GVKLTFTADA LTAIAKRAIK
RKTGARGLRS IMEDILLDTM FELPGLEGVE EVVVNEEAVN SGAKPLLIYT EVTKKKDATA
S
|
|---|
| |