Gene Rsph17029_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1795 
Symbol 
ID4895874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1893624 
End bp1894724 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID640112389 
Productspermidine/putrescine-binding periplasmic protein 
Protein accessionYP_001043674 
Protein GI126462560 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.843102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.582581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAA CAGGGGAGAA TTCAGTGAGG CGCATCATCC TTCTGTCCAC GGCCCTGGCA 
GGCTTCGCCC TGCCCGCCGC GGCGGACCAG ATTGCCGTCC TCGGCTGGGG CGGGGCCTAC
ACGACCAGCC AGGTCGAGGC CTACCACAAG CCGTTCACCG CCAAGACCGG GGTGGGCGTG
GTGTCGGTCG ACACCGACAA CCCGGCCACG CCGATCAAGG CGCAGGTCGA ATCTGGTAAC
GTCACCACCG ACGTGGCCAG CGTCGAATAT GCCGACGCCG TGCGGCTCTG CGACGAGGGA
CTGCTCGAGG AGATCGATCC CGCCATCCTG CCGGCCGCGC CCGACGGCAC CCCCGCCGAA
GAGGATTTCC TGCCCGGCTC GCTCGCCGAC TGCTTCGTGG CGACGGACGT CTTCTCGACC
GTTCTGGCCT ATGACGCCTC GAAATTCGCC GATGGGGCGG CCCCGACCAA GCTCGCCGAT
TTCTTCGATC TGGAGAAATT CCCGGGCAAG CGCGGGATGC GCAAGTCGGC CAAGGTGAAC
CTCGAAATGG CGCTCCTCGC CGACGGGGTG CCGGCGGCCG AGGTCTATGA CATGCTGCGC
ACCGACGAAG GCGTGGAGCG CGCCTTCAAG AAGCTCGATT CGATCAAGAG CCAGATCGTC
TGGTGGGAAG CCGGCGCCCA GCCGCCGCAG CTGCTCGCGG ATGGCGAGGT GGCCATGACC
ATCGCCTACA ACGGCCGGAT CTTCAACGCC GCCATCACCG AGAACAAGCC GTTCGAGATC
GTCTGGGACG GGCAGGTCTA CGAGGTCGAA GGCTGGGTGA TCCCGAAGGG CGCGCCGAAC
CTCGAGCTGG CCAAGGATTT CGTGGCCTTC TCGACCAGCG CCGAACCGCT GGCCAAGGCC
GCGGAATGGA TCAGCTACGG CCCGCCGCGC AAATCCTCGG CGCCGCTCGT CGGCACCTTC
ATGGACGGCA AGACCGAGAT GGCGCCGCAC CTGCCCACGA GCCCCGAGAA CATGACGAAT
GCGCTCGCCT CCGACTACGA GTTCTGGGTC GATCACGACA CCGAGCTGAA CGAGCGCTTC
AACGCCTGGC TCGCCGGCTG A
 
Protein sequence
MRSTGENSVR RIILLSTALA GFALPAAADQ IAVLGWGGAY TTSQVEAYHK PFTAKTGVGV 
VSVDTDNPAT PIKAQVESGN VTTDVASVEY ADAVRLCDEG LLEEIDPAIL PAAPDGTPAE
EDFLPGSLAD CFVATDVFST VLAYDASKFA DGAAPTKLAD FFDLEKFPGK RGMRKSAKVN
LEMALLADGV PAAEVYDMLR TDEGVERAFK KLDSIKSQIV WWEAGAQPPQ LLADGEVAMT
IAYNGRIFNA AITENKPFEI VWDGQVYEVE GWVIPKGAPN LELAKDFVAF STSAEPLAKA
AEWISYGPPR KSSAPLVGTF MDGKTEMAPH LPTSPENMTN ALASDYEFWV DHDTELNERF
NAWLAG