Gene Rsph17029_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1765 
Symbol 
ID4897853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1862384 
End bp1863583 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID640112359 
ProductOpgC protein 
Protein accessionYP_001043647 
Protein GI126462533 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.411843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC ATCCCCCCAG GGTCGCGGGA CGCGACAAGC GGCTCGACTT CTTCCGCGGT 
CTGGCTCTGG TGATGATCTT CATCAACCAT GTGCCCGGAA CGGTCTGGGA GAATTTCACC
AGCCGCAATT TCGGCTTCTC GGACGCGGCC GAGGGCTTCG TGCTGATGTC GGGGATCGCG
GCCGGCCTCG CCTATTCCAA GGGTTTCTGG ACGCCGACCT GGGCCGCGGC CCGCAAGATC
TGGCGCCGGG CCTGGACGCT CTATCTCGTC CACCTCCTCA CGACGTTCTG GGCCATCGCC
ATTTCGGCGG CCTTCGCGCT CTGGTTCGCG GCCTCGGATC TGCTGCATCA GAATCAGGTC
TGGATCCTGT TCCAGAAGCC TCTGGGCTTC CTGATCGGCG TGCCCGCGCT GACCCACCAG
CTCGGCTACA CGAACATCCT GCCGCTCTAT GCGACGCTGC TTCTGGTCAC ACCTGCCCTC
ATTCTGGCGG CGCTGCGGTT TCCGCGGACG CTCCTCGTCG GATCGGTGTT GCTCTGGGCA
CTCACCGGCC AGTTCCGGCT GAACCTGCCG AACTTTCCCA ATCCGGGCGG CTGGTTCTTC
AACCCGCTCG CCTGGCAGAT CATCTTCGTC ATGGGGTTGC TGACCGGCGT GGCCCTGAAG
CAGGGCAAGC GATTCGTGCC GATCCTGCCT TGGCTGCAGG CCCTGACGGC GGCCTATCTG
CTGCTGGCCC TGATCTGGCT GAAGGTGCCT GTGGTCTACG ACATGATGAA CCATTTCATG
CGTGTCCTGA ACCGGGATCT GGGCCTGCCC TTCTACATCA CCGCCTTCGA CAAGACCTTT
GCCACCGTTC CGCGGCTTCT TCATGTGCTG GCGCTGGCCT ACCTGCTCAG CACACTCGGC
TGGGTGCGCC ATCTGGCGGC CTCTGGCTGG GCCGAGCCCT TCGCCCTGCT CGGGCGGCAC
TCGCTGCAGG TCTTCGCCAC CGGCACCATC CTCTGTTTCG CGCTTCAGGG GGTGAAGGAT
CTGACCGGAG ACCAGTTCCT GTTCGACACG CTGCTGCTGG CCATGGGGCT TTCGGTGCAG
TTCGCCGTGG CCTGGCTCGC GGATCGCTGG AAGGGAGAGG CGTCGGCCCG CCCCGCCCCG
AAAGCCGCGC CTGCGGGGGC TGCGACGGCG CCCCAGACCG CTGCGCGCGG GACCGCCTGA
 
Protein sequence
MPDHPPRVAG RDKRLDFFRG LALVMIFINH VPGTVWENFT SRNFGFSDAA EGFVLMSGIA 
AGLAYSKGFW TPTWAAARKI WRRAWTLYLV HLLTTFWAIA ISAAFALWFA ASDLLHQNQV
WILFQKPLGF LIGVPALTHQ LGYTNILPLY ATLLLVTPAL ILAALRFPRT LLVGSVLLWA
LTGQFRLNLP NFPNPGGWFF NPLAWQIIFV MGLLTGVALK QGKRFVPILP WLQALTAAYL
LLALIWLKVP VVYDMMNHFM RVLNRDLGLP FYITAFDKTF ATVPRLLHVL ALAYLLSTLG
WVRHLAASGW AEPFALLGRH SLQVFATGTI LCFALQGVKD LTGDQFLFDT LLLAMGLSVQ
FAVAWLADRW KGEASARPAP KAAPAGAATA PQTAARGTA