Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1735 |
Symbol | |
ID | 4897535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1831434 |
End bp | 1832048 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640112329 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001043617 |
Protein GI | 126462503 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.418155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGGC TACTCGGCCT GTCGCGGTCG ATCGACCGCA TGAACGAGCT CATCGGCCGC GGGGTATCCT GGCTGATCCT GATCGCGATC TTCATCAGCG CAGGCAACGC CACGGTGCGG AAGGTGCTGA ACACCTCTTC CAACGCCTGG CTCGAGCTTC AATGGTATCT GTTCGGCGCG GCCTTCCTGT TCGCGGCGGC CTACACGCTC AAGCAGAACG AGCATATCCG CATCGACATC GTCTACGGGC TCTTCTCGCG GCGGGTGCAG CACTGGATCG ACCTCTTCGG GCATCTGGTC TTCCTCATGC CCTTCGTGCT GCTGATGCTC TATTACCTCG GCCCCTACGT CGAACGGTCC TGGAGGACGG GCGAGATCTC GAACAACGCG GGCGGCCTGA CGATCTGGCC CGCCAAGTCG CTGCTCCTGA TAGGCTTCTT CCTCCTCGCC CTGCAGGGCC TGTCCGAGAT CATCAAGAAG ATCGCCGTGA TGCGGGGCCT CATCCCGGAT CCTGCGCCCT TCATCTCGGC CCATGAGGCG GCCGAGCGCG AGGGCGAACT GCTCGCGGGC GAGGCGAAGC TCAGCGACAC CCGGCCGGGC GAGGTGCTGA AATGA
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Protein sequence | MGGLLGLSRS IDRMNELIGR GVSWLILIAI FISAGNATVR KVLNTSSNAW LELQWYLFGA AFLFAAAYTL KQNEHIRIDI VYGLFSRRVQ HWIDLFGHLV FLMPFVLLML YYLGPYVERS WRTGEISNNA GGLTIWPAKS LLLIGFFLLA LQGLSEIIKK IAVMRGLIPD PAPFISAHEA AEREGELLAG EAKLSDTRPG EVLK
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