Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1730 |
Symbol | |
ID | 4896316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1824366 |
End bp | 1825364 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640112323 |
Product | ABC transporter related |
Protein accession | YP_001043612 |
Protein GI | 126462498 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.072502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA TAACCCTGCG CAACGTCCAG AAGCGGTTCG GTGAGGCGGT CGTCATCCCC TCGCTCGACC TCGACATCGA GGATGGCGAG TTCGTCGTCT TCGTCGGCCC CTCGGGCTGC GGCAAGTCCA CGCTCCTGCG CCTGATCGCG GGCCTCGAGG ATGTGTCGGA CGGCCAGATC ACGATCGACG GGCGCGACGC CACCGAGATG CCGCCGGCAA AGCGCGGCCT CGCCATGGTG TTCCAGAGCT ACGCCCTCTA TCCGCACATG ACGGTGAAGA AGAACATCGC CTTCCCGCTG CGGATGGCGA AGATGGAGCC GCAGGAGATC GAGCGGCGCG TGTCGAACGC GGCCAAGATC CTGAACCTCA CCAACTATCT CGACCGCCGC CCCGGACAGC TCTCGGGCGG GCAACGCCAG CGGGTGGCCA TCGGGCGCGC CATCGTGCGC GAGCCGGCGG CCTTCCTGTT CGACGAGCCG CTCTCGAACC TCGATGCCGC GCTGCGGGTC AACATGCGGC TCGAGATCAC CGAGCTGCAC CAGTCGCTCG AGACCACGAT GATCTATGTC ACCCACGATC AGGTCGAGGC CATGACCATG GCCGACAAGA TCGTGGTGCT GAACGCGGGC CGGATCGAGC AGGTGGGCTC GCCCCTCACC CTCTACCGCA ATCCGGCGAA CCTCTTCGTG GCGGGCTTCA TCGGCAGCCC GAAGATGAAC CTGATCGAGG GGCCAGAGGC CGCGAAACAC GGCGCCACCA CCATCGGGAT CCGCCCCGAG CATATCGACC TGTCGCGCGA GGCGGGGGCG TGGGAGGGCG AGGTCGGCGT CTCGGAACAT CTCGGCTCCG ACACGTTCCT GCATGTGCAT GTCGCGGGGA TGCCCACCCT CACCGTGCGG ACGGGCGGAG AGTTCGGCGT CCACCACGGC GACCGGGTCT GGCTCACGCC GCAGGCCGAC AAGATCCACC GCTTCGGCGC CGACGGAAAG GCGCTCTGA
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Protein sequence | MGKITLRNVQ KRFGEAVVIP SLDLDIEDGE FVVFVGPSGC GKSTLLRLIA GLEDVSDGQI TIDGRDATEM PPAKRGLAMV FQSYALYPHM TVKKNIAFPL RMAKMEPQEI ERRVSNAAKI LNLTNYLDRR PGQLSGGQRQ RVAIGRAIVR EPAAFLFDEP LSNLDAALRV NMRLEITELH QSLETTMIYV THDQVEAMTM ADKIVVLNAG RIEQVGSPLT LYRNPANLFV AGFIGSPKMN LIEGPEAAKH GATTIGIRPE HIDLSREAGA WEGEVGVSEH LGSDTFLHVH VAGMPTLTVR TGGEFGVHHG DRVWLTPQAD KIHRFGADGK AL
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