Gene Rsph17029_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1730 
Symbol 
ID4896316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1824366 
End bp1825364 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID640112323 
ProductABC transporter related 
Protein accessionYP_001043612 
Protein GI126462498 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.072502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA TAACCCTGCG CAACGTCCAG AAGCGGTTCG GTGAGGCGGT CGTCATCCCC 
TCGCTCGACC TCGACATCGA GGATGGCGAG TTCGTCGTCT TCGTCGGCCC CTCGGGCTGC
GGCAAGTCCA CGCTCCTGCG CCTGATCGCG GGCCTCGAGG ATGTGTCGGA CGGCCAGATC
ACGATCGACG GGCGCGACGC CACCGAGATG CCGCCGGCAA AGCGCGGCCT CGCCATGGTG
TTCCAGAGCT ACGCCCTCTA TCCGCACATG ACGGTGAAGA AGAACATCGC CTTCCCGCTG
CGGATGGCGA AGATGGAGCC GCAGGAGATC GAGCGGCGCG TGTCGAACGC GGCCAAGATC
CTGAACCTCA CCAACTATCT CGACCGCCGC CCCGGACAGC TCTCGGGCGG GCAACGCCAG
CGGGTGGCCA TCGGGCGCGC CATCGTGCGC GAGCCGGCGG CCTTCCTGTT CGACGAGCCG
CTCTCGAACC TCGATGCCGC GCTGCGGGTC AACATGCGGC TCGAGATCAC CGAGCTGCAC
CAGTCGCTCG AGACCACGAT GATCTATGTC ACCCACGATC AGGTCGAGGC CATGACCATG
GCCGACAAGA TCGTGGTGCT GAACGCGGGC CGGATCGAGC AGGTGGGCTC GCCCCTCACC
CTCTACCGCA ATCCGGCGAA CCTCTTCGTG GCGGGCTTCA TCGGCAGCCC GAAGATGAAC
CTGATCGAGG GGCCAGAGGC CGCGAAACAC GGCGCCACCA CCATCGGGAT CCGCCCCGAG
CATATCGACC TGTCGCGCGA GGCGGGGGCG TGGGAGGGCG AGGTCGGCGT CTCGGAACAT
CTCGGCTCCG ACACGTTCCT GCATGTGCAT GTCGCGGGGA TGCCCACCCT CACCGTGCGG
ACGGGCGGAG AGTTCGGCGT CCACCACGGC GACCGGGTCT GGCTCACGCC GCAGGCCGAC
AAGATCCACC GCTTCGGCGC CGACGGAAAG GCGCTCTGA
 
Protein sequence
MGKITLRNVQ KRFGEAVVIP SLDLDIEDGE FVVFVGPSGC GKSTLLRLIA GLEDVSDGQI 
TIDGRDATEM PPAKRGLAMV FQSYALYPHM TVKKNIAFPL RMAKMEPQEI ERRVSNAAKI
LNLTNYLDRR PGQLSGGQRQ RVAIGRAIVR EPAAFLFDEP LSNLDAALRV NMRLEITELH
QSLETTMIYV THDQVEAMTM ADKIVVLNAG RIEQVGSPLT LYRNPANLFV AGFIGSPKMN
LIEGPEAAKH GATTIGIRPE HIDLSREAGA WEGEVGVSEH LGSDTFLHVH VAGMPTLTVR
TGGEFGVHHG DRVWLTPQAD KIHRFGADGK AL