Gene Rsph17029_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1728 
Symbol 
ID4897655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1822654 
End bp1823526 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content64% 
IMG OID640112321 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001043610 
Protein GI126462496 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC AGCATTCAAA GACTGCGGCG CGTCTGATGA TTTCCCCGGC CGTGATCCTC 
CTGTTCCTGT GGATGATCGT GCCGCTGTCG ATGACGCTCT ACTTCAGCTT CCTGCGCTAC
AACCTCCTCA TGCCGGGGAT GGAGAGCTTC ACCGGCTGGG ACAATTACTA TTACTTCCTG
ACCGATCCGG CCTTCTCCGC GGCCCTGACC AACACGATCC TTCTCGTGGT GGGCGTCCTT
CTCATCACCG TGGTGGGCGG GGTCCTGCTC GCGCTCCTGC TCGACCAGCC CTTCTGGGGT
CAGGGCATCG TGCGCGTGCT GGTGATCGCG CCCTTCTTCG TCATGCCCAC CGTCTCGGCG
CTGGTCTGGA AAAACATGTT CATGAACCCC GTGAACGGGA TGTTCGCCCA TATCGCCCGC
GGGCTCGGCC TTCCGCCGTT CGACTTCCTG TCGCAGGCGC CGCTGGCCTC GATCATCGGC
ATCGTGGCCT GGCAGTGGCT GCCCTTCGCC ACGCTGATCC TTCTGACGGC GCTCCAGTCG
CTCGACCGCG AGCAGATGGA GGCGGCCGAG ATGGACGGCG CCTCGGCGCT CGACCGGTTC
ATCCACATCA CCGTGCCGCA CCTGACGCGG GCCATCACCG TGGTGGTGCT GATCCAGACC
ATCTTCCTTC TGGGCGTCTT CGCCGAGATC CTCGTCACGA CGAACGGCGG ACCCGGCACG
GCCTCGACCA ACATCACCTA CCTCGTCTAT GCGCAGTCGC TCCTGAATTA CGACGTGGGG
GGCGGGTCGG CCGGCGGCAT CGTCGCCGTG GTGCTCGCCA ATATCGTGGC GATCTTCCTG
ATGCGCATGA TCGGCAAGAA TCTGGACGCC TGA
 
Protein sequence
MATQHSKTAA RLMISPAVIL LFLWMIVPLS MTLYFSFLRY NLLMPGMESF TGWDNYYYFL 
TDPAFSAALT NTILLVVGVL LITVVGGVLL ALLLDQPFWG QGIVRVLVIA PFFVMPTVSA
LVWKNMFMNP VNGMFAHIAR GLGLPPFDFL SQAPLASIIG IVAWQWLPFA TLILLTALQS
LDREQMEAAE MDGASALDRF IHITVPHLTR AITVVVLIQT IFLLGVFAEI LVTTNGGPGT
ASTNITYLVY AQSLLNYDVG GGSAGGIVAV VLANIVAIFL MRMIGKNLDA