| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1721 |
|---|
| Symbol | |
|---|
| ID | 4897823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1814526 |
|---|
| End bp | 1817135 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640112314 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001043603 |
|---|
| Protein GI | 126462489 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCCG AAAGCCGCGA CACGGCTCCG GGGGGCGTGT TCGAGCGCTG GACGGGGTAT
GTGCTCGTCC TCGCGGTCGG CGTCACGGCT CTGGTGGCGG CGATCTTCAT CTTTTCCGAC
ATCGACAAGC AGCTCGAGCA GAATCGGGTC GCCCATCTCG ACAACCGGAC CTGGGTGCTC
GCGCAGTTCG AGGTGGATGT GCTGAATCTC GCCTCCGCGG CGCAGATGGC CGCCTACCGG
TCGGACGATC CGGCCCGACT CGACGAGCTC CGCAAGAGGT TCGACATCCT CTACAGCCGC
GTGGACATCG TCCGCGGATT CGAAAGCGGC ACCATCGCGC CGCTCGAGGC CGACGTGCTG
CCGATCTTCG ACGGGCCGGA GGGGTTCTTC GCCCGCTGGA TCCCCGTCAT CGACGGGCCG
GATGCGGACC TGAGAGTCGC TCTTCCGCAG CTGATCGGGG AGCTCGAGAG GGATGCGGGA
TCGGTCCGCT CGGGCGTGGT GCGCGCGCTC GGGGAAGTGA TGACCGTCTC GGACGCACGG
CGCGCGACGC TGCGCCAGTC GCTCCAGACG TTCGCGCTGG CGGCCCTGGG ACTTCTGGGG
CTGATGGGGG TGCTGATCGC CGTGGTGATC GTGCAGAGCA ACGCCCGCCG TCGCCGCGGG
ATGCTGCTCG AACGGTCGGT CCACAACCTG CGCGCCACCA TCGAATCCTC GCTGGATGCG
GTGGTGGTGC TCGACCACAT GGGGCGGGTG GTCGAATGCA ACCGTGCGGC GCTGGACATG
TTCCGCTGGT CGCCGCAGAC GGCCGAAGGC ACGAATTTCG TCGACTATAT CCGCACGGAC
GATGCCGACG GGTTGCTGCG TCCTCACGCG CGGGGCGAGG AAGAGGCGGA GCTGAACCCG
ACCGGGCGCG ACGGGCGCAT TACGATGATG GCGCAGCGCA CGAACGGCTC GACCTTCCCG
GTCGAGGTCT CGGTGGCCGA GGCGCAGGGC GCGTCGCAGG ATCCGTTCTT CATCGCCTTC
ATCCGCGACA TCTCCGAGCG GCTCGAGCGT GAGGAGAGCC TGAAGAAGGC GCGCAATGAC
GCGCTGAAGG GCGAAGAGGC CAAGTCGCGC TTCCTCGCGG TCATGAGCCA CGAGATGCGC
ACGCCGCTCA ACGGCCTGAT GGCCGCCTCG GACCTGCTGC AGACCTCGAC GGATCTCACC
GACAGACAGC GCTGGCTCAC CGACATCGTG ATCGGCTGCG GCTCGGCGGC ACTCGATCAG
GTGAACAACG TGCTCGAGCT GACGCGGCTG TCGGACAAGG ACGGCGCGAG CTACGCCCGC
ACGGTCTTCT CGCCGGTGGA TCTCATCGAG GGGCTGATCC GGCAGAACCA GCCGCAGGCC
GACAAGCGCG GCAACAAGCT GTGGTTCGCG CAGCCCAAGA ACCCGGTGCC GCCCGTGCTC
GGGCAGCGCC ACCTGTTCCT GCGGGTGATG TACAACCTGA TCGGCAATGC CATCAAGTTC
ACCGACAATG GCAAGGTCTC GGTCGAGCTG CTCTGGCACC CGGGCCGCAC GTCCGGCACC
GTGGACCTCT GCATCCATGT GGGCGATACG GGCATCGGCA TTGCGGAGGA GCATCTCGAC
ACGATCTTCC GCAATTTCGA GACGCTCGAC GCCTCCTACG GGCGCATCCG CGAAGGGACG
GGCCTCGGCC TCGGCATCGC CAAGCTCGCC GCCGAGACCA TGGGCGGGCA GATCGACGTC
CAGAGCAAGC TGGGGCTCGG CTCCGTCTTC ACGCTTCGCC TGCAGCTGCC CGTGGCGCAG
GGGGCCGAGG CGGCCCAGGA GGAGTTCGCG GAGGATGCGC CATCGGCCGG GGACGGCGCC
CGCTCGATCC TCGTGGTCGA TGACAATGCG ATCAACCGTC AGCTCCTCGC CGAGATCCTG
CGGATGGCGG GGCACGAGGT GGCGACGGCC GAGGATGGCG CCGAGGCGGC CGAGGCGGCT
GGCGCCCGCC GCTTCGACCT GATCCTGATG GATGTCTCGA TGCCGCGCGT GGACGGGCTC
GAGGCCACGC GACGGATCCG GCGGGCCGGC GCCTCGACCG ACACGCCCAT CCTCGGTGCC
ACGGCCCATG CCGACCCGGA CCGTGTCCCC GACTTCCTCG CAGCCGGCAT GAATGACGTG
CTGGTGAAGC CCATCACCCG CTCGGCGCTG TTTCGCGCCA TCCGCCAGTT CACGGAAACC
AGCGCCGCGG TCGAGGAGGT GCTCCCCGCT GGCGACCCGC CACCCGACGA TCTGCCGCTG
ATCGACGCCG AGCTGCGGGC CGACCTCGAG GGCAATCTCG GGCCCGATTA TATCGCGGGC
ATGATCGGCA GGGTGCTGAG CGAGACGGGC GACGCGCTCC CCGAGATGCG GCGCCTGCAC
GAGGCGGGCG ATCATCTGGC GGCCGCCAAG CTCGCGCACC GGACGGCGGG GGCGGCGGCG
GCCGTGGGCC TCATGGCGCT GCACCGCAGC CTTGCGAGCT ACGAAACGGC AGCCGACGCG
TCGAACACGG CTGAGGCCGC GCGCGCGCTC GAGAGCCTGC CCGCGACGCT GGAACGCACC
GCTGCCGCCT GTCAGGCCAC CGCCGCCTGA
|
|---|
| Protein sequence | MFSESRDTAP GGVFERWTGY VLVLAVGVTA LVAAIFIFSD IDKQLEQNRV AHLDNRTWVL
AQFEVDVLNL ASAAQMAAYR SDDPARLDEL RKRFDILYSR VDIVRGFESG TIAPLEADVL
PIFDGPEGFF ARWIPVIDGP DADLRVALPQ LIGELERDAG SVRSGVVRAL GEVMTVSDAR
RATLRQSLQT FALAALGLLG LMGVLIAVVI VQSNARRRRG MLLERSVHNL RATIESSLDA
VVVLDHMGRV VECNRAALDM FRWSPQTAEG TNFVDYIRTD DADGLLRPHA RGEEEAELNP
TGRDGRITMM AQRTNGSTFP VEVSVAEAQG ASQDPFFIAF IRDISERLER EESLKKARND
ALKGEEAKSR FLAVMSHEMR TPLNGLMAAS DLLQTSTDLT DRQRWLTDIV IGCGSAALDQ
VNNVLELTRL SDKDGASYAR TVFSPVDLIE GLIRQNQPQA DKRGNKLWFA QPKNPVPPVL
GQRHLFLRVM YNLIGNAIKF TDNGKVSVEL LWHPGRTSGT VDLCIHVGDT GIGIAEEHLD
TIFRNFETLD ASYGRIREGT GLGLGIAKLA AETMGGQIDV QSKLGLGSVF TLRLQLPVAQ
GAEAAQEEFA EDAPSAGDGA RSILVVDDNA INRQLLAEIL RMAGHEVATA EDGAEAAEAA
GARRFDLILM DVSMPRVDGL EATRRIRRAG ASTDTPILGA TAHADPDRVP DFLAAGMNDV
LVKPITRSAL FRAIRQFTET SAAVEEVLPA GDPPPDDLPL IDAELRADLE GNLGPDYIAG
MIGRVLSETG DALPEMRRLH EAGDHLAAAK LAHRTAGAAA AVGLMALHRS LASYETAADA
SNTAEAARAL ESLPATLERT AAACQATAA
|
|---|
| |