Gene Rsph17029_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1717 
Symbol 
ID4897809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1811523 
End bp1812194 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID640112310 
Productflagellar hook capping protein 
Protein accessionYP_001043599 
Protein GI126462485 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.751206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG CCGTCGACGC TTCCTATGCC ACGGGGCTCG CCCTCCAGAC CTCGACGCAG 
GCCAAGGGCA AGTCGAACCT CGGCCAGCAG GATTTCCTGA CGCTGCTGAC CACGCAGCTG
CAGAACCAGG ACCCGTTCCA GCCGATGGAG AACGGCGAGT TCCTGGCCCA GATGGCACAG
TTCTCGACCG TGTCCGGGAT CGAGCAACTC AACAGCACGC TGACCGGGAT CGGCGACGGG
CTCGGTGCCT TCCGCACCGC CACGGCCGCC TCGCTGATCG GCAAGTCGGT GCTGGTGCCG
GGCACGCTCG TGCGCGCCGA CGGCACGGGG ACGGTGCGCG GCGCGGTCAC GCTCACCGAT
CCGGCCGAGG CGCTGGTCGT GACCTATTCG AACAGCGTGA CGGGCGAGCT CCTCCACAGT
CAGACCCTCG GGGCGCAGAG CGCGGGCGAT GTGAACTTCG GCTGGGACGG CGTGCCGTCC
TCGCTCGTTT CCTCCCGCGT GCCGCTGCGG GTGAGCGTCA CGGCCGCCTC GTCCGACGGC
TCGGTCCCGC TCGCCCCGAA GGTCTATGCC CGCGTCCTGT CGGTCGGCAC CAGCGCCGAC
GGCAAGAGCA CGGTCCTCGA GGTCGAGGAC AAGGGCAATG TCGCCGCCGA CACCGTCACC
TCCTTCCGCT GA
 
Protein sequence
MTTAVDASYA TGLALQTSTQ AKGKSNLGQQ DFLTLLTTQL QNQDPFQPME NGEFLAQMAQ 
FSTVSGIEQL NSTLTGIGDG LGAFRTATAA SLIGKSVLVP GTLVRADGTG TVRGAVTLTD
PAEALVVTYS NSVTGELLHS QTLGAQSAGD VNFGWDGVPS SLVSSRVPLR VSVTAASSDG
SVPLAPKVYA RVLSVGTSAD GKSTVLEVED KGNVAADTVT SFR