| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1708 |
|---|
| Symbol | |
|---|
| ID | 4897627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1800292 |
|---|
| End bp | 1801089 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640112301 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_001043590 |
|---|
| Protein GI | 126462476 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0133415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGC CCTTGCCCGG GAGGGGCATG AGGTTCGCGC TCGTCCTGAT CCTGACGCTT
CTGGCCGCCC CCGCGCTCGC GGCGGACGAG GGCTGCGAGA CGCTCGCGGC CCGGGCCGGT
GCCGAGGCCG GCATACCCGA GGGGCTGATG GAGGCGATTG CCCGCGTGGA ATCGGGCCGG
GGCGGGCGCG CCTGGCCCTG GACGCTGAAC CAGGGCGGGC GCGGCATGTT CTTCGAGACC
CGGGCCGAGG CGGTGCGCAT GCTCCAAGCG ACGGTCGCCT CGGGCGTGTC CAACATCGAC
GTGGGCTGCA TGCAGCTCAA CTGGCGCTGG CATGCGCCCG CCTTCGCCTC GGCCGACGAG
ATGATCGATC CAGTGCGCAA CACCCGCCAT GCGGCGCGCT TCCTGCGCGA ACTCCGCGCC
CGTCTCGGCT CGTGGGAGGC GGCGACGGCG GCCTATCATT CGGCCGATCG CGGGCGGGGC
GCGGCCTATC TCGCCAAGGT CGAGGCCGAG CGCGGCGGAT CGCGCCTGGC CGAGGCCGCG
ACGGACCTGC CCGACGAGGC GACCCTCGCC GCCGCGCGCG TCCAGGGCCT CCTCGTGCTG
GCTCCGCAGC CGATGGTGAG CCTCGGCGAG ACGCAGGGAG GGCTGCCCCG GGCGGCCTCC
GACATTCCCT CGCAGGGGCC TCTGGAGCTT CGCGCAGCCG CCCCGGACCT CCTCGCCGAG
GCGGACCTTC CGCAGCGCCT GCGCGCCCGG TTCCACGCGG TCCAGTCCTT CCGCGACCTG
CTCGCAATGC AACCGTGA
|
|---|
| Protein sequence | MARPLPGRGM RFALVLILTL LAAPALAADE GCETLAARAG AEAGIPEGLM EAIARVESGR
GGRAWPWTLN QGGRGMFFET RAEAVRMLQA TVASGVSNID VGCMQLNWRW HAPAFASADE
MIDPVRNTRH AARFLRELRA RLGSWEAATA AYHSADRGRG AAYLAKVEAE RGGSRLAEAA
TDLPDEATLA AARVQGLLVL APQPMVSLGE TQGGLPRAAS DIPSQGPLEL RAAAPDLLAE
ADLPQRLRAR FHAVQSFRDL LAMQP
|
|---|
| |