Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1690 |
Symbol | |
ID | 4896728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1782443 |
End bp | 1783258 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640112283 |
Product | hypothetical protein |
Protein accession | YP_001043572 |
Protein GI | 126462458 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0395614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000583749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCGC AGACGCCCAT CGGACCCGAG GATGTGCTGG CCCTGATCCG CGAGACCAAC GCGCGCGGCT TCGGCCGTTC GGACCTGCCC GCGCCGGGGC CGGAAGGCCC GTTCCGCCCG ATGCCGCTCT CGGGCCTCGG CCGTGCGGCG CCGGAAGCGC CACGCCCCCC CGATGCCGCA GGGCCGGCCC CCGAAAGCCG TGCGCCGGCC GCGCCCGCGG GGCTCGTGCC GCCCGACCCT GCCCCGCCTG CTCCGGCGCT GCCCGATCCC GCGCTTCTGG AGGCCGCACG CGCGGAAGGC CGCCGCGACG GCCATGCCGA GGGACGGGCG GAGGGCCGCC GCGAGGCCGA GGCCGAATTC GCCCATGCGC GCGAGACCTT CCTGCGGCTG GCCGAGCGGC TCTCTGCGCC CGCGCCCGGC GATACGGCCC GGCTCGCGCG GATGATCGAC GGCGCGGTCT GCGCTCTGGC CAGCCAGCGG GCGGGGATCG AAATCGACAG GCATCCCGCA GGCTTCGCCG CCCGCCTCGA GGCGCTGGCC GACCGCGTGG CGCAGGGCTT GCGGCAGGTG ACGCTGCGCC TCAACCCCGA GGATCTGCAG GCGCTGGCCC CGCATCTGCC CGGCTCGGAC CTTCTGTCCG AGGCGCGGAT CGCCGCCGAT CCCCGTCTGG CGCGCGGCGA TCTGGAGGTG CGCGCCGAGG GGATCGTGCT CTCCGATCTG CTCGCGCCGG CGGCTTCGCT GCCGGGGGCG GCCGCCGACA GTCCCGCCGC GCCGGAGGCT CCCGGTGCGG CCTTCTCCGC GGAGCCTCAC CGATGA
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Protein sequence | MTAQTPIGPE DVLALIRETN ARGFGRSDLP APGPEGPFRP MPLSGLGRAA PEAPRPPDAA GPAPESRAPA APAGLVPPDP APPAPALPDP ALLEAARAEG RRDGHAEGRA EGRREAEAEF AHARETFLRL AERLSAPAPG DTARLARMID GAVCALASQR AGIEIDRHPA GFAARLEALA DRVAQGLRQV TLRLNPEDLQ ALAPHLPGSD LLSEARIAAD PRLARGDLEV RAEGIVLSDL LAPAASLPGA AADSPAAPEA PGAAFSAEPH R
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