| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1628 |
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| Symbol | ispG |
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| ID | 4895116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1718659 |
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| End bp | 1719792 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640112219 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001043510 |
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| Protein GI | 126462396 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.946626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA ATCATGTCCG CCCCTGGCGC AACATCCACC GCCGCAAGTC GCGGCAGATC
ATGGTGGGCA ATGTTCCGGT GGGGGGCGAT GCGCCGATCT CGGTGCAGAC GATGACGAAC
ACCATCACCG CCGATGCGCC CGCGACCATC GCGCAGGTGC TCCGCGCGGC CGAGGCGGGG
GCCGACATCG TCCGCGTGTC GGTGCCCGAT GAGGCCTCGA CCCGGGCGCT GAAGGAGATC
GTGGCGGCAA GCCCGGTTCC GATCGTGGCC GACATCCATT TCCACTACAA GCGCGCCATC
GAGGCGGCCG AGGCGGGCGC GGCCTGCCTC CGGATCAACC CGGGCAACAT CGGCGATGCG
AGCCGGGTGC GCGAGGTCAT CAAGGCCGCG CGGGATCATG GCTGCTCGAT GCGGATCGGG
GTGAATGCGG GCTCGCTCGA AAAGCATCTG CTGGACAAGT ATGGCGAGCC CTGCCCGGAG
GCGATGGTCG AGTCGGGCCT CGATCACATC AAGATCCTTC AGGACAACGA CTTCCACGAG
TTCAAGATCT CGGTGAAGGC CTCGGACGTG TTCCTCGCTG CGGCGGCCTA TCAGGCGCTG
GCCGATGCGA CGGATGCGCC GATCCATCTC GGGATCACCG AGGCAGGCGG ACTGACCGCC
GGCACGGTGA AATCGGCAGT GGGTCTCGGG AACCTCCTCT GGTCGGGGAT CGGCGACACG
CTGCGGGTCT CGCTCTCGGC CGATCCGGTG GAAGAGGTGA AGGTCGGCTA CGAGATCCTG
AAGTCTCTGG GCCTCCGCCA CCGCGGCGTC ACCATCATCT CCTGTCCCTC GTGCGCGCGG
CAGGGCTTCG ACGTCATCAA GACGGTGGCG GAACTCGAGG ATCGGCTGGC CCATGTCACC
ACCTCGATGA GCCTTTCCAT CATCGGCTGC GTGGTGAACG GCCCCGGCGA GGCGCTGATG
ACCGACATCG GCTTTACCGG CGGCGGCAAC GGCTCGGGGA TGGTCTATCT GGCCGGCAAG
CAGGCCCACA AGCTCGGCAA CGAGCGGATG ATCGACGAGA TCGTGTCGAT GGTCGAAAGC
CGTGCGGCCG AGATCGAGGC CGAGAAGCTC GCGGCGGCCG AAGCGGCCGA GTAG
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| Protein sequence | MSLNHVRPWR NIHRRKSRQI MVGNVPVGGD APISVQTMTN TITADAPATI AQVLRAAEAG
ADIVRVSVPD EASTRALKEI VAASPVPIVA DIHFHYKRAI EAAEAGAACL RINPGNIGDA
SRVREVIKAA RDHGCSMRIG VNAGSLEKHL LDKYGEPCPE AMVESGLDHI KILQDNDFHE
FKISVKASDV FLAAAAYQAL ADATDAPIHL GITEAGGLTA GTVKSAVGLG NLLWSGIGDT
LRVSLSADPV EEVKVGYEIL KSLGLRHRGV TIISCPSCAR QGFDVIKTVA ELEDRLAHVT
TSMSLSIIGC VVNGPGEALM TDIGFTGGGN GSGMVYLAGK QAHKLGNERM IDEIVSMVES
RAAEIEAEKL AAAEAAE
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