Gene Rsph17029_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1623 
SymbolprfB 
ID4895061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1711097 
End bp1712224 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID640112214 
Productpeptide chain release factor 2 
Protein accessionYP_001043505 
Protein GI126462391 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.622299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.50404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG AGACCCAGAA CCAAGTCGAG GCCATCCGGC GCTCGCTCGC GCTGCTCGGC 
CAGCGCATGG ATCTCGAGAC CGCGCCGCAC CGGCTCGAGG AATTCGACGC GATGATCGAG
GACGGCAACC TGTGGAACGA TCCGGCCCGC GCGCAGAAGC TGATGCGCGA GCGCCAGCAG
CTCATGGACC AGCTCTCGAC CTACAGGCTG ATCGACACCG GGCTGCGCGA CAATGTCGAG
CTGATCGAGC TCGGCGAGGC CGAGGGCGAC GAGGAGATCG TGACCGAGGC CGAGGCGTCG
ATCCGCGCGC TGGTCGAGAC GGCCGGCGCG AAGGAGCTCG AGGCGCTGCT CGACGGCGAG
GCGGACGGCA ACGACACGTT CCTCGAGATC AATGCGGGCG CAGGCGGCAC CGAGAGCTGC
GACTGGGCCT CGATGCTGGC GCGGATGTAT GTCCGCTGGG CCGAACGCAA GGGCTACAAG
GTCGAGCTGC AGTCGGAATC GGCGGGCGAG GAGGCGGGCA TCAAGTCGGC CGCCTACAAG
ATCTCGGGGC CGAACGCCTA TGGCTGGCTG AAGTCGGAGA GCGGCGTTCA CCGGCTGGTG
CGGATCTCGC CCTACGACTC GGCGGCTCGG CGGCACACCT CCTTCTCGTC GGTCTGGGTC
TATCCGGTGG TGGACGACAA TATCGAGATC GAGATCCCTG CGAACGACAT CCGTATCGAC
ACCTATCGCT CGTCGGGCGC GGGCGGACAG CACGTCAACA CCACCGACTC GGCGGTGCGG
ATCACCCACC TTCCCACCAA TATCGTCGTG ACCTCCTCGA TGAAGTCGCA GCACCAGAAC
CGCGAAGCGG CGATGAACGC GCTGAAGGCG CGGCTCTACC AGCTCGAGCT CGACAAGCGG
AACGCCGCGA TCAACGCCCA GCACGAGGCC AAGGGCGAGG CGGGCTGGGG CAACCAGATC
CGCTCCTATG TCCTTCAGCC CTATCAGATG GTGAAGGACC TGCGGACGGG CGTCGAGACC
TCGGACACGC AGGGCGTGCT CGACGGCGAT CTGGACCGGT TCATGCAGGC GACGCTCGCG
CAGGATGTGG CCGGCAAGAG CCGCGCGGAA GCCAACGCCG AAGAGTAA
 
Protein sequence
MRTETQNQVE AIRRSLALLG QRMDLETAPH RLEEFDAMIE DGNLWNDPAR AQKLMRERQQ 
LMDQLSTYRL IDTGLRDNVE LIELGEAEGD EEIVTEAEAS IRALVETAGA KELEALLDGE
ADGNDTFLEI NAGAGGTESC DWASMLARMY VRWAERKGYK VELQSESAGE EAGIKSAAYK
ISGPNAYGWL KSESGVHRLV RISPYDSAAR RHTSFSSVWV YPVVDDNIEI EIPANDIRID
TYRSSGAGGQ HVNTTDSAVR ITHLPTNIVV TSSMKSQHQN REAAMNALKA RLYQLELDKR
NAAINAQHEA KGEAGWGNQI RSYVLQPYQM VKDLRTGVET SDTQGVLDGD LDRFMQATLA
QDVAGKSRAE ANAEE