Gene Rsph17029_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1622 
Symbol 
ID4895068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1709948 
End bp1710724 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID640112213 
Producthypothetical protein 
Protein accessionYP_001043504 
Protein GI126462390 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.559223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.211497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAA GCTACCTGGA ATCGGCCGAG GCCGTTCCGG AGGTGCGCTT GCTCACCCCG 
GAAGACCTGC GGCTTGTGCT ATTTGCCGGA ATGCGTGACT TCAGACGCGC CCCGGCCTTC
GGTTTGTTCT TTGCCGCCAC CTATGTGATC TTTGGCTGGA TCATTCTCTA TGCGCTCACC
ACAAGCGGAA ATCTCTGGTG GATCCTGCCC GCTGCTGCGG GCTTTCCCAT CCTCGGCCCC
TTCATCGCCT GCGGCCTCTA CGAGGTCAGC CGCCGGCTGG AACTGGGCCT GCCGCTGCAC
TGGGGGGAGG TGCTCGGCGT GATCCTCAGC CAGAAGGATC GCCAGATCCC GTCCATGGCG
GCGATCGTGG TGATCTTCTT CCTGTTCTGG AACTTCCTGT CCCACATGGT CTTCGCCCTC
TTCATGGGGA TGCAGCCCAT CGTGAACATC TCGAGCTCGT TCGAGTCTTT CCTGACGGCG
CACGGGCTCA CGCTGCTCGT CGTCGAGCTT CTGGTGGGCG CGGTCTTCGC GAGCATCCTG
TTCTCGATCA CCGTGGTCAG CCTGCCGCTG CTCCTCGACC GCGAGATCGA TTTCGTGACC
GCGATGATCA CCAGCGTGCA GGTGGTGCAG GCCAATCCGG TGCTGATGCT GTCGTGGGGC
ATCACCATCG CGGGCATCCT GTTCTTCGCG ATGCTGCCCG GATTTCTCGG CTTGCTGATC
GCCCTGCCGG TGCTGGGCCA TGCGACCTGG CATCTCTATC GCCTGGCGCT CGACTGA
 
Protein sequence
MSQSYLESAE AVPEVRLLTP EDLRLVLFAG MRDFRRAPAF GLFFAATYVI FGWIILYALT 
TSGNLWWILP AAAGFPILGP FIACGLYEVS RRLELGLPLH WGEVLGVILS QKDRQIPSMA
AIVVIFFLFW NFLSHMVFAL FMGMQPIVNI SSSFESFLTA HGLTLLVVEL LVGAVFASIL
FSITVVSLPL LLDREIDFVT AMITSVQVVQ ANPVLMLSWG ITIAGILFFA MLPGFLGLLI
ALPVLGHATW HLYRLALD