Gene Rsph17029_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1621 
Symbol 
ID4897492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1709234 
End bp1709752 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID640112212 
Producthypothetical protein 
Protein accessionYP_001043503 
Protein GI126462389 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.12526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTA AGAGCAGAAT CAACGAGCCC GGTCCCAAAC AGGGCGAGGC CGAAAGGCCG 
AAGAATCAGG AAGCTCCCGT GCAGAAACCC TCGACCGACT TTGCGCCCGG CGCGCCGAAA
CCCAAGCCTT CCGCCTCGGT CCTGTCGTCT GACCTGACGG TGGTGGGCAA CCTGCGCACG
ACCGGCGACA TTCAGGTCGA AGGCACGGTG GAAGGCGACA TCCGCGCGCA CCTGCTGACT
GTGGGCGAGA GCGCCACGAT CCGCGGCGAG ATCGTGGCGG ACGACATCGT GGTCAATGGC
CGCGTCATCG GCCGCGTCCG CGGCCTGAAG GTGCGCCTGA CCTCGACCGC CCGCGTCGAG
GGCGACATCA TCCACAAGAC CATCGCCATC GAGTCGGGCG CCCATTTCGA GGGCTCCGTC
CAGCGGCAGG AAGATCCGCT TCAGAGCGGC AAGGGCGGCG CCTCCGCGGC TCCGCAGGCG
GCCCCGGCCC CGCAGGCCAC CAAACCCGCC GATCTCTGA
 
Protein sequence
MFSKSRINEP GPKQGEAERP KNQEAPVQKP STDFAPGAPK PKPSASVLSS DLTVVGNLRT 
TGDIQVEGTV EGDIRAHLLT VGESATIRGE IVADDIVVNG RVIGRVRGLK VRLTSTARVE
GDIIHKTIAI ESGAHFEGSV QRQEDPLQSG KGGASAAPQA APAPQATKPA DL