Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1595 |
Symbol | |
ID | 4896591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1678279 |
End bp | 1679172 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640112186 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001043477 |
Protein GI | 126462363 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0923411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGGG ACAAGCTCAG AATCTTCCAC GCGGTGGCCG ACGCGGGCAG CCTGACCCAT GCCGGTGACA CGCTCCACCT CTCGCAGTCG GCGGTCAGCC GCCAGATCCG GGCCCTGGAA GAGAGCCTGA ACGTGACCCT CTTCCACCGT CACGCGCGGG GACTGATTCT CACCGAACAG GGGGAGCTCC TGTTCGAGGC CACCAACCAG ATGGTCAAGC GACTGGAAGC CGCAGCCGCG CGGATCCGCG ACAGCGAGGA CGAGGTCTTC GGCGAGCTCA GGGTCACCAC GACCACCGGC TTCGGCACGC TCTGGCTCGC GCCGCGTCTG GTGGGGCTCT ACAAGAAATA TCCCGCCCTG AAGATCGACC TCATGCTCGA GGAGCGCGTG CTCGACCTGC CCATGCGCGA GGCGGACGTG GCGATCCGCA TGAAGGAGCC GAGCCAGGCC GACCTGATCC GCAAGCGCCT CATGTCGATC CGGATGCGCC TCTATGCCTC GCCCACCTAT GCGGCCGAGC ACGGGATGCC CGAGAAGATG GAGGATTTCG CGCAGCACCG GTTGATCTGC CAGCTTCCCG GAGCGCCTCA GGTGGCGGCC GGCGCGGCCC TCGTGCAGGA GCTGATGTCC AACGACATCC CCTCGATGCT CACGGTTAAC AACTATTTCG GCGTCCTTCA GGCGGTGCTG AACAATCTCG GGATCGGCGT CATGCCGGAC TATCTGGCCG TGGCCTTCCC CCAGCTCATA CGCGTCCTGC CGGACATCGA GTCGAACGAC GTGCCGGTGT TCCTCGCCTA CCCCGAGGAA CTGCGCCATT CGAAGCGCGT GGCGGCCTTC CGCGAGTTCG TGATGGAAGA GATCTCGCTC TACCGGAAGC AGCAGCAGAC CTGA
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Protein sequence | MDWDKLRIFH AVADAGSLTH AGDTLHLSQS AVSRQIRALE ESLNVTLFHR HARGLILTEQ GELLFEATNQ MVKRLEAAAA RIRDSEDEVF GELRVTTTTG FGTLWLAPRL VGLYKKYPAL KIDLMLEERV LDLPMREADV AIRMKEPSQA DLIRKRLMSI RMRLYASPTY AAEHGMPEKM EDFAQHRLIC QLPGAPQVAA GAALVQELMS NDIPSMLTVN NYFGVLQAVL NNLGIGVMPD YLAVAFPQLI RVLPDIESND VPVFLAYPEE LRHSKRVAAF REFVMEEISL YRKQQQT
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