Gene Rsph17029_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1576 
Symbol 
ID4895288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1656553 
End bp1657239 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID640112167 
ProductUbiC transcription regulator-associated domain-containing protein 
Protein accessionYP_001043458 
Protein GI126462344 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0273735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.277013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG GCTGGGAGGA CATCCGCGCC GAGGTGCTGC GCCGGATCGA GGCGCGCCAT 
TGGGCGCCGG GCGCGCTGAT CCCGACAGAG GAGGCGCTGT CCGAGGAACT TGGCTGCGCC
CGCACCACCG TGAACCGGGC GCTGCGCGAT CTGGCCGCGG CCGGGCTACT GGAGCGCCGC
CGCAAGGCCG GCACGCGCGT GGCGCTTCAC CCGGTGCGGC GCGCGCGCTT CGATATTCCC
GTGACGCGGC TCGAGATCGA GGGCCGCGGG CAGAGCTATG CGTTCCACCT GATCGAGGAG
CGCCGGGCCG AGCCGCCCGC CGCCGTGGCC TCACTCTTTC GCAGCCTGCC CGGTGCGCCC
CTCCTGCGGC TGCGGGGTCT GCATCTGGCC GACAACCGGC CCGCGATCTA CGAGGAGCGC
TGGCTCGATC CGGCCGTGCT GCCCGAGCCC GCGCCCGATT TCCGCCGCAT CAGCCCGAAC
GAGTGGCTGG TGAGCCATGT GCCCTGGACC GGCGGCGACA TCGTCTTCTC GGCCGCGAAC
GCGAGCCCCG AGGAGGTGGA CATCCTCGGT TGCGCACCGG GCGCCGCGCT CTTTCTCTGC
GAGCGGGTGA CGGAGGCGGA GGGCCGCCCG ATCACCTCGG TGCGCCTCCT CCATGCGCCG
GGCTACCGGC TGCGCGCGGA TCTCTGA
 
Protein sequence
MALGWEDIRA EVLRRIEARH WAPGALIPTE EALSEELGCA RTTVNRALRD LAAAGLLERR 
RKAGTRVALH PVRRARFDIP VTRLEIEGRG QSYAFHLIEE RRAEPPAAVA SLFRSLPGAP
LLRLRGLHLA DNRPAIYEER WLDPAVLPEP APDFRRISPN EWLVSHVPWT GGDIVFSAAN
ASPEEVDILG CAPGAALFLC ERVTEAEGRP ITSVRLLHAP GYRLRADL