Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1576 |
Symbol | |
ID | 4895288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1656553 |
End bp | 1657239 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640112167 |
Product | UbiC transcription regulator-associated domain-containing protein |
Protein accession | YP_001043458 |
Protein GI | 126462344 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0273735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.277013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTCG GCTGGGAGGA CATCCGCGCC GAGGTGCTGC GCCGGATCGA GGCGCGCCAT TGGGCGCCGG GCGCGCTGAT CCCGACAGAG GAGGCGCTGT CCGAGGAACT TGGCTGCGCC CGCACCACCG TGAACCGGGC GCTGCGCGAT CTGGCCGCGG CCGGGCTACT GGAGCGCCGC CGCAAGGCCG GCACGCGCGT GGCGCTTCAC CCGGTGCGGC GCGCGCGCTT CGATATTCCC GTGACGCGGC TCGAGATCGA GGGCCGCGGG CAGAGCTATG CGTTCCACCT GATCGAGGAG CGCCGGGCCG AGCCGCCCGC CGCCGTGGCC TCACTCTTTC GCAGCCTGCC CGGTGCGCCC CTCCTGCGGC TGCGGGGTCT GCATCTGGCC GACAACCGGC CCGCGATCTA CGAGGAGCGC TGGCTCGATC CGGCCGTGCT GCCCGAGCCC GCGCCCGATT TCCGCCGCAT CAGCCCGAAC GAGTGGCTGG TGAGCCATGT GCCCTGGACC GGCGGCGACA TCGTCTTCTC GGCCGCGAAC GCGAGCCCCG AGGAGGTGGA CATCCTCGGT TGCGCACCGG GCGCCGCGCT CTTTCTCTGC GAGCGGGTGA CGGAGGCGGA GGGCCGCCCG ATCACCTCGG TGCGCCTCCT CCATGCGCCG GGCTACCGGC TGCGCGCGGA TCTCTGA
|
Protein sequence | MALGWEDIRA EVLRRIEARH WAPGALIPTE EALSEELGCA RTTVNRALRD LAAAGLLERR RKAGTRVALH PVRRARFDIP VTRLEIEGRG QSYAFHLIEE RRAEPPAAVA SLFRSLPGAP LLRLRGLHLA DNRPAIYEER WLDPAVLPEP APDFRRISPN EWLVSHVPWT GGDIVFSAAN ASPEEVDILG CAPGAALFLC ERVTEAEGRP ITSVRLLHAP GYRLRADL
|
| |