| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1572 |
|---|
| Symbol | |
|---|
| ID | 4897299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1652407 |
|---|
| End bp | 1653702 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640112162 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001043454 |
|---|
| Protein GI | 126462340 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.207353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.412707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA CCCTCCTCCT CTTCGCCTTC GTGGCGCTGC TCTTCGTGGG GACGGGCGTC
CTGCAGAGCT GGAACTCGGC GCTCGGCATC CTGAACATGG CGCTGATCTC GGCGATCATG
GCGCTCGGGG TGAACATGCA GTGGGGCTAT GCGGGCCTCT TCAACGTGGG CGTGATGGGC
TTCGTGGCGC TCGGCGGCCT TGCGGTGGTG GTGACGGCGG CCCAGCCGGT GCCGGGGGCC
TTTGCCGCCG GCGGCTGGGG CGTGCTTGCC GCGCTGGCGC TGGGCGCGGC CACCATCGGC
GCGGCCGTCG CGGTCTGGCG GCGGATGGCG AAGGGCTGGG CGCGGACGGT GGCGCTGCTT
GCGGTGCTGA TCGGCGGCTT CTTCGCCTAT CGCGCCATCT TCGATCCGGC CGTCGCCGCC
ATCGAGGCGA TCAACCCCGC GCTCTACGGC AATATCGGCG GCCTCGGCCT GCCGGTGCTG
CTGGCCTGGC CCGCGGGCGG GCTTCTCGCG GCCCTCGCCG CCTGGGCCAT CGGCAAGACG
GCGCTGGGGC TGCGGTCGGA CTATCTCGCC ATCGCGACGC TCGGCATCGC CGAGATCATC
ATTGCGGTGA TGAAGAACGA GGACTGGCTC GCGCGCGGCG TCAAGAACAT GATCTCGCTG
CCCCGCCCCG TGCCTTACGA GGTGGATCTC CAGCAGAGCG CCGGCTTCGT GGCCTGGGCG
CAGGGCTGGG GCTACGATCC CGTCACCGCT TCGGCCATCG TGGTAAAGCT CTGCTATGCG
GCCCTGTTCG TGGCGGTGCT CGCGATCATC GTGACGCTCT CGGAGCTCGC GCTGAGATCG
CCGTGGGGCC GGATGATGCG GGCGATCCGC GACAACGAGG TGGCGGCCGA AGCCATGGGC
AAGGACGTGA CCCGCCGGCA TCTGCAGATC TTCGTCCTCG GCGCGGCCGT CATCGGCATC
GCGGGGGCGA TGATGACCAC GCTCGACAGC CAGCTCACGC CCGGAACCTA CAATCCGCTG
CGCTTCACCT TCCTCGTCTG GGTGATGGTG ATCGTGGGCG GATCGGGTTC GAACTGGGGC
GCCGTGCTGG GCGGCTTCCT CATCTGGTGG CTCTGGGTCA TGGTCGAGCC GATCGGGCTG
TCTCTCCTCG GAGCGATCAC CGCCGGGATG GCCGATGGCT CGTGGCTGAA GGCCCATCTG
CAGGATTCCG CGGCGCATAT GCGGCTCCTG ACCATGGGGC TGATCCTGCT TCTCGTGCTG
CGCTTCTCGC CGCGCGGGCT TATCCCAGGG CGCTGA
|
|---|
| Protein sequence | MNRTLLLFAF VALLFVGTGV LQSWNSALGI LNMALISAIM ALGVNMQWGY AGLFNVGVMG
FVALGGLAVV VTAAQPVPGA FAAGGWGVLA ALALGAATIG AAVAVWRRMA KGWARTVALL
AVLIGGFFAY RAIFDPAVAA IEAINPALYG NIGGLGLPVL LAWPAGGLLA ALAAWAIGKT
ALGLRSDYLA IATLGIAEII IAVMKNEDWL ARGVKNMISL PRPVPYEVDL QQSAGFVAWA
QGWGYDPVTA SAIVVKLCYA ALFVAVLAII VTLSELALRS PWGRMMRAIR DNEVAAEAMG
KDVTRRHLQI FVLGAAVIGI AGAMMTTLDS QLTPGTYNPL RFTFLVWVMV IVGGSGSNWG
AVLGGFLIWW LWVMVEPIGL SLLGAITAGM ADGSWLKAHL QDSAAHMRLL TMGLILLLVL
RFSPRGLIPG R
|
|---|
| |