Gene Rsph17029_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1569 
Symbol 
ID4896228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1649811 
End bp1650593 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID640112159 
ProductABC transporter related 
Protein accessionYP_001043451 
Protein GI126462337 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.51859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.809659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCAG TCGAAAACCT GCACAGGCAC TTCGGCGGTT TCCGGGCCGT GGATGGCGCA 
TCGCTGCAGA TCGCCACCGG CTCGATCACC GGGCTGATCG GACCGAACGG GGCGGGAAAG
ACCACGCTGT TCAACGTGAT CGCGGGGCGG CTGCCGCCGA CCTCGGGACG GGTCACGATG
GACGGCGAGG AGATCACCGG CCTGCCGCCG CACGCGCTCT TTCACAAGGG GCTGTTGCGC
ACCTTCCAGA TCGCGCACGA GTTCGGCTCG ATGAGCGTAC GGGAAAATCT CATGATGGTT
CCGGCCCGCC AGTCCGGCGA GACGCTGTGG AACGCCTGGT TCCGCCGCGG CGCGGTGGCG
GCCGAGGAGC GGCGGCTGCG CGACAAGGCC GACGAGGTGC TCGAGTTCCT GACGATCTCG
CATCTCGCCG ACGAGAAGGC CTCGAACATC TCGGGCGGGC AGAAGAAGCT TCTCGAGCTC
GGGCGCACCA TGATGGTGGA TGCCAAGATC GTCTTCCTCG ACGAGGTGGG CGCGGGCGTG
AACCGGACGC TCCTGAACAC GATCGGCGAC GCCATCGTGC GGCTGAACGA GGAGCGCGGC
TATACGTTCT GCGTCATCGA GCATGACATG GATTTCATCG CCCGCCTCTG CAATCCGGTC
ATCTGCATGG CCGAGGGCAA GGTGCTGGCG GAAGGAACCG TCGAGGAAGT GAAGAATGAC
GAGCGGGTGA TCGAGGCCTA TCTCGGCACC GGCCTCAAGA ACAAGGTGGT GGGTCATGCG
TGA
 
Protein sequence
MIAVENLHRH FGGFRAVDGA SLQIATGSIT GLIGPNGAGK TTLFNVIAGR LPPTSGRVTM 
DGEEITGLPP HALFHKGLLR TFQIAHEFGS MSVRENLMMV PARQSGETLW NAWFRRGAVA
AEERRLRDKA DEVLEFLTIS HLADEKASNI SGGQKKLLEL GRTMMVDAKI VFLDEVGAGV
NRTLLNTIGD AIVRLNEERG YTFCVIEHDM DFIARLCNPV ICMAEGKVLA EGTVEEVKND
ERVIEAYLGT GLKNKVVGHA