Gene Rsph17029_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1548 
SymbolpdxA 
ID4895818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1628187 
End bp1629155 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID640112138 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_001043430 
Protein GI126462316 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGC CGATCGCCCT CACCTGCGGC GAGCCCGCGG GCATCGGCCC CGAGATTGCC 
GTCAAGGCCC GGCAGGCGCT GGGGAAGCGG CTGCCCTTCT TCTGGATCGG CGATCCGGCG
CACCTGCCCG AGGGCAGCGC ATGGCAGGGG ATCACGGCGC CCTTCGAGGC AGCCGACGTG
CCGGCCGAGG CGCTGCCCGT GCTTTTGCAT CGCTTTCCCG ATGCGCAGCG GCCGGGGCAG
CCCACGCCCG GCAATGCGGC CGAGGTGGTG GCGGTGATCG CGCGCGCGGT CTCGCTCGTC
CAGTCCGGGG CGGCCTCGGC GATCTGCACC GCGCCCATCC ACAAGAAGGC GCTGAAGGAC
GGCGCGGGCT TCGCCTTTCC CGGCCACACG GAGTTCCTCG CCTCCCTCGC GGGCGTGGGT
GAGGTGGTGA TGATGCTGGC CTGCCCGGGC CTGCGGGTCG TGCCCGCGAC GATCCACATT
CCCCTGGCCG AGGTGCCCGC GACCCTGACG CCCGACCTGC TGGACAGCGT GCTCCGCATC
ACGGATGCGA CGCTCCGCCG GGATTTCGGC ATCGCTGAGC CGCGGATCTG GGTGACGGGG
CTCAATCCCC ATGCCGGAGA GGGCGGGGCC ATGGGGGCCG AGGATGCGGC GGTGATCGCG
CCGGTGATCG AGCGGCTGCG GGCCGAGGGG CTGCGGCTGA CCGGGCCGCT GCCGGCGGAC
ACGATGTTTC ACGGAGGCGC CCGGGCGCGC TACGACTGCG CGGTGGCTAT GTATCACGAT
CAGGCGCTGA TCCCGATCAA GACCATCGAT TTCGCGGGCG GGGTGAACGT GACGCTGGGC
CTGCCCTTCA TCCGCACCTC GCCCGATCAC GGCACGGCCT TCGACATCGC GGGCAAGGGC
GTGGCCGATC CGTCGAGCCT CGTCGCGGCG CTCGAGATGG CTTCGGAGAT GGCGCAGGCG
CGCGGCTGA
 
Protein sequence
MIAPIALTCG EPAGIGPEIA VKARQALGKR LPFFWIGDPA HLPEGSAWQG ITAPFEAADV 
PAEALPVLLH RFPDAQRPGQ PTPGNAAEVV AVIARAVSLV QSGAASAICT APIHKKALKD
GAGFAFPGHT EFLASLAGVG EVVMMLACPG LRVVPATIHI PLAEVPATLT PDLLDSVLRI
TDATLRRDFG IAEPRIWVTG LNPHAGEGGA MGAEDAAVIA PVIERLRAEG LRLTGPLPAD
TMFHGGARAR YDCAVAMYHD QALIPIKTID FAGGVNVTLG LPFIRTSPDH GTAFDIAGKG
VADPSSLVAA LEMASEMAQA RG