Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1516 |
Symbol | |
ID | 4896948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1585116 |
End bp | 1586225 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640112106 |
Product | ABC transporter related |
Protein accession | YP_001043398 |
Protein GI | 126462284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00369229 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0599486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC TGAAGCTGAC CGGGGTCGAG AAGGCCTACG GCGAGGTGCG CGTGCTGCGC GACATCGACC TGACCATCGA GAAGGGCGAG CTCATCGTCT TCGTCGGGCC TTCGGGCTGC GGCAAGTCCA CGCTCCTGCG GATGATCGCG GGGCTCGAGC GGATCACCGG CGGCACGCTC GAGATCGACG GGCAGGTGGT CAACGACGTG CCGCCCGCGC AGCGCGGCAT CGCCATGGTG TTCCAGAGTT ATGCTCTGTA TCCGCACATG ACCGTGCGGC AAAACATGGA ATTCGCGCTG AAGATCGCGG GACAGTCGAA GGCCGAGATC GCCCGCGCCG TCGAGAACGC GGCCCGGATC CTGCAGCTCA CGCCCTATCT CGACCGGCTG CCCCGCGCGC TCTCGGGCGG GCAACGGCAG CGGGTCGCCA TCGGCCGGGC CATCGTGCGC GATCCCAAGG TCTATCTCTT CGACGAGCCG CTCTCGAACC TCGATGCGGC GCTCCGGGTG GCCACGCGGA TCGAGATCGC CCAGCTCAAG GAGAAGATGC CCGACCGGAC GATGATCTAC GTCACACACG ATCAGGTCGA GGCGATGACG CTTGCGAGCC GGATCGTCGT GCTGGAGGGC GGCGGGATCA GTCAGGTGGG CACGCCTCTC GAGCTTTACA CCCGCCCGCG GAATGCCTTC GTCGCCCGCT TCATCGGCTC GCCCGCGATG AACCTGCTGC CTGGCGAGAT CGTCGAGACC GGCCCCGAGA CGGTCGTGCG GCTCGATTCA GGCGGCGTGG CGCGCACGGC GATCCCGACG GAGCCGGAGG ATCTGGGGCT TCTGGTCGAT CTCGGCGTGC GTCCCGAAGA TCTGGTCAAG ACCGATGGCC CCCCGCTCTA CGAAGGCGAG GTCGAGATCA CCGAGGCCCT GGGCGAGGTG ACGCTGCTCT ATTTCGTGCC GCGCGACGAG GGGGGGCAGG TGGTGGCGAA GCTGCCCGGC ATTCAGGCCG ACCTGCGCCA CCGGACCGTG CGCCTCGGCG CCGACCCCGC CCGGCTGCAC CTCTTCCACG AGGGCCAGTC CCTGCTCTAC CGCGACCGGA CGGAGCTCGC CCGGGCCTGA
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Protein sequence | MADLKLTGVE KAYGEVRVLR DIDLTIEKGE LIVFVGPSGC GKSTLLRMIA GLERITGGTL EIDGQVVNDV PPAQRGIAMV FQSYALYPHM TVRQNMEFAL KIAGQSKAEI ARAVENAARI LQLTPYLDRL PRALSGGQRQ RVAIGRAIVR DPKVYLFDEP LSNLDAALRV ATRIEIAQLK EKMPDRTMIY VTHDQVEAMT LASRIVVLEG GGISQVGTPL ELYTRPRNAF VARFIGSPAM NLLPGEIVET GPETVVRLDS GGVARTAIPT EPEDLGLLVD LGVRPEDLVK TDGPPLYEGE VEITEALGEV TLLYFVPRDE GGQVVAKLPG IQADLRHRTV RLGADPARLH LFHEGQSLLY RDRTELARA
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