| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1513 |
|---|
| Symbol | |
|---|
| ID | 4897128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1580533 |
|---|
| End bp | 1581807 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640112103 |
|---|
| Product | RNA polymerase, sigma 54 subunit, RpoN |
|---|
| Protein accession | YP_001043395 |
|---|
| Protein GI | 126462281 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
|---|
| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.142275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTCGT TGCAGCTCCG GCTGGGCCAG CGGCTGGCCC AGCGGACCGT GCTCGTGCAG
CGGGCCGAGA TCCTCGAGGC CACCGGAGCG GACTGGGCGG AGCGGATCGC GGCCGAGGCG
CAGCGGAACC CGTTCCTGCG GGTGAGGCAG CCGGCCACGG CCGCGCCGAT CCCCGAAAGC
GCAGCCCTGC CGCCCGACCT GCACGCCTGG CTCGGCTCGC AGATCCGCAT GGCCATGGCC
GATTCCGAGG ACCGGGCGCT GGCCTTCCGC CTGCTCGAGG CGCTGGAGCC CTCGGGCTGG
CTGGACCAGC CTCTGTCGCG CCTCGCGCCC GGCGCCGAGG AGCAGGCGGC GCGGGTGCTC
CACCGCCTGC AGCAGATGGA GCCCGCCGGC ATCTTCGCCC GCGACCTGCG CGAGTGCCTT
GCCTTGCAGG CGCGCGACCG GGGACAGCTC GATCCCGCGA TGGCGGCCGT GCTGGATCGC
CTCGACTGTC TCGCCTCCGA CGGACCGGCG GCCGTGGCGC GCGCAACCGG GCTCGAGGAG
CAGACGGTGC TCCGCTGCCT CGAGCTGATC CGGCGCATGG ATCCGAAACC GGGCGCTGCC
TTTGCCGCCG AAGACGCTCC CCTGCGCGAG CCCGACCTTA TCGCGCGCCG CACCGCCTCG
GGCTGGAGCG TCGAGCTGAA CCGCTCGCTT CTGCCGGAGG TCCGGGTGGC ACCCCTGCCG
GACGGCAGCC CGGCCGATGT CCGCCAGATG CATCAGGAGG CCCTGTCGCT GGCCAAGGCG
ACCGGCCTGC GGGGACGGAC CCTCCTTGCC GTGGGGGCGC TGGTGGTGGA GCGCCAGCGT
GCCTTTCTGG ATGAGGGGCC GGCCGCGCTC GTCGCCCTGG GGATCGGCGA GGCGGCCGAT
GCGCTGGCCC TGCACCCGAG CACGATCAGC CGCACCGTCA CTGGGTTGCT GATGGCGACC
CCGCGCGGGC TCGTGGCGGT GCGCGATCTC TTCTGCGCGC GGCTGGCGGA GGGAACCGGA
GCGCTCAGCG CACCGGCCCT TCAGGCCTTG ATCCGCGAGA CCATTGCCGC CGAGAGCGCG
CAGGCGCCGC TGGAGGATGG CGAGATCGTC GAGGTGCTGG CCCGGCGCGG CATCCATGTC
GCGCGGAGAA CCGTGGCCAA GCACCGCACG CTCGCGGGCC TGCCGCCTGC CGCTGTGAGA
CGCCGGGCGG TTCCCTCGGG CTCGGAGGCA GTGGCCTTTG GCCGGCAGCC TCTGCCGCTC
GGAGGCAGGA GCTGA
|
|---|
| Protein sequence | MVSLQLRLGQ RLAQRTVLVQ RAEILEATGA DWAERIAAEA QRNPFLRVRQ PATAAPIPES
AALPPDLHAW LGSQIRMAMA DSEDRALAFR LLEALEPSGW LDQPLSRLAP GAEEQAARVL
HRLQQMEPAG IFARDLRECL ALQARDRGQL DPAMAAVLDR LDCLASDGPA AVARATGLEE
QTVLRCLELI RRMDPKPGAA FAAEDAPLRE PDLIARRTAS GWSVELNRSL LPEVRVAPLP
DGSPADVRQM HQEALSLAKA TGLRGRTLLA VGALVVERQR AFLDEGPAAL VALGIGEAAD
ALALHPSTIS RTVTGLLMAT PRGLVAVRDL FCARLAEGTG ALSAPALQAL IRETIAAESA
QAPLEDGEIV EVLARRGIHV ARRTVAKHRT LAGLPPAAVR RRAVPSGSEA VAFGRQPLPL
GGRS
|
|---|
| |