Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1497 |
Symbol | |
ID | 4895091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1563889 |
End bp | 1565064 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640112087 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001043379 |
Protein GI | 126462265 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0655249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.432966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGC GCCTCATCAT TGCCGTGATC CTGCTTGCCG TGATCGTGGG CGGCATCGTG GGCTTCAACC GGTTCCGGGA CGGCATGATC AGCGACTTCT TCGCCAACCG GAAGCCGGCG CCGATCACCG TCTCGACCTC CGTGGCCGAG CCGATCACCT GGCGGCCGGG GATCGAGGCG ATCGGAACCG CGGTCGCCGC GCAGGGCGTC GATCTCGCGG TCGAGGCCGG GGGCACGGTG CGGCAGATCC TGTTCAAGTC GAACGAACAT GTCGAAGAGG GGCAGAAGCT CCTGCAGATC TCTGAGCGCG AGGAGCTGGC CGATCTCGCG GCGGCCGAGG CGGAGCTCGA GCTGGCGGAG ACCGAACTCG CCCGTGCCCG CACGCTGCGC GAGCGGGGCG TGTCCGCGGT GAACAACCTC GACACGGCTC AGGCGCAGGC GGCCTCGGCG CGGGCGCAGG TGGCCAAGAT CCAGGCGATG CTGCAGCAGA AGGAACTGAC GGCACCCTTC GCGGGCGTCA TCGGCATCAC GCAGGTGGAT GTGGGCGGCT ATGTCACCCC CGGCACCGTC TATGCGACGC TGCAGGACCT CGATGCGATG CGGGTCGATT TCGCTCTGCC CGAGCAGCAG ATCGGCCGGA TCCGGCCGGA CATGCGGGTG ACGGCCACCT CCGAGGTGGG CGAATATCGT GCGAGCGGGA AGATCACCGG CATCGAGCCG AAGGTCGATC CCAACTCGCG ACTCGTGACC GTTCGGGCCG AGGTCTCCAA CGAGAGCGGG CAGATCTATC CGGGCCAGTT CCTGCGGGTG CGGGTCGAAC TGCCCGACGA GGAGCAGGTG ATCGCCCTGC CGCAGACCGC CCTGATGACC AGCCTCTACG GCGACTCGGT CTATGTCGTC CGCGATGGCG AGGAGGAGGA TCAGAAGGTG GTCGAGCAGG TCTTCGTCCA GCCGGGCCGA CGCGACGGCG ACATGATCGA GATCGTCTCG GGACTGGAGC CGGGGGACGT GGTGGTGAAC GCGGGCCAGA ACCGTCTGTC GGGCGGGGCC CCGGTGACCA TCGACAATAC GGTGAGCCCG GCCGGCACGC AGCCGGCGGA GGCGCCGGAG CAGGCGGACG GGCAGGCGCA GGCGCAGGAG CCTGCCGCCG CCGGCGCCGA GACCGAGACG GAGTGA
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Protein sequence | MVKRLIIAVI LLAVIVGGIV GFNRFRDGMI SDFFANRKPA PITVSTSVAE PITWRPGIEA IGTAVAAQGV DLAVEAGGTV RQILFKSNEH VEEGQKLLQI SEREELADLA AAEAELELAE TELARARTLR ERGVSAVNNL DTAQAQAASA RAQVAKIQAM LQQKELTAPF AGVIGITQVD VGGYVTPGTV YATLQDLDAM RVDFALPEQQ IGRIRPDMRV TATSEVGEYR ASGKITGIEP KVDPNSRLVT VRAEVSNESG QIYPGQFLRV RVELPDEEQV IALPQTALMT SLYGDSVYVV RDGEEEDQKV VEQVFVQPGR RDGDMIEIVS GLEPGDVVVN AGQNRLSGGA PVTIDNTVSP AGTQPAEAPE QADGQAQAQE PAAAGAETET E
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