Gene Rsph17029_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1495 
Symboltgt 
ID4897563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1559508 
End bp1560638 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID640112085 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001043377 
Protein GI126462263 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.474706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC GATTCAGCTT CGAGCTCACG GCGACCGATG GGCGCGCGCG CACGGGGGTG 
ATCTCGACCC CGCGCGGCGA GATCCGCACC CCGGCTTTCA TGCCGGTGGG CACAGCCGGC
ACGGTGAAGG CGATGCTGCC CGAAAATGTG CGCGCGACGG GGGCCGACAT CCTGCTCGGC
AACACCTATC ACCTGATGTT GCGCCCGACC GCCGAACGGG TGGCGCGGCT GGGCGGCCTG
CACCGGTTCA TGAACTGGGA CCGGCCGATC CTCACCGACT CGGGCGGGTT TCAGGTGATG
AGCCTCGCGG ATCTGAGGAA GCTCTCCGAG GAGGGCGTGA CCTTCCGCTC ACACATCGAC
GGATCGAAAC ATCACCTGAG CCCCGAGCGC AGCATGGAGA TCCAGCGGCT TCTGGGCTCG
GACATCGTGA TGGCCTTCGA CGAATGCCCG GCGCTGCCCG CGACCGAGGA GGCGGTGGCC
CAGTCCATGC GTCTCTCGAT GCGGTGGGCG CGCCGGTCGC GCGAAGCCTT CGGCGACCGC
CCGGGACACG CGCTCTTCGG GATCATGCAG GGCGGCGTCA CGCGCGATCT GCGCGAGGAG
AGCGCGGCCG CGCTCCGCGA GATCGGCTTC GAGGGCTATG CCATCGGCGG GCTTGCGGTG
GGCGAGGGAC AGGAGGCGAT GTTCGGCGTG CTCGACTATG CGCCGGGCTT CCTGCCCGAG
GACCGGCCGC GCTATCTGAT GGGCGTGGGC AAGCCCGACG ACATCGTGGG CGCGGTGGAG
CGGGGCGTCG ACATGATGGA TTGCGTGCTG CCCTCGCGCT CGGGGCGCAC CGGGCAGGCC
TGGACGCGGC GGGGGCAGGT CAACATCAAG AACGCGCGCC ACATGGACGA TCCGCGCCCG
CTCGATGAGG CCTGCAGCTG TCCGGCCTGC CGCAGCTACT CACGGGCCTA TCTGCACCAC
GTCTTCCGCG CGCAGGAGAT CATCGCCTCG ATGCTGCTGA CCTGGCACAA CCTGCATTAT
TATCAGGAGC TGATGCAGGG GCTGCGCACG GCCATCGCGG CCGGGCGGCT CGGCGAGTTC
GTGGCGGCCT TCCATGCCGC GCGGGCCGAG GGCGACATCG AGCCGCTTTG A
 
Protein sequence
MTQRFSFELT ATDGRARTGV ISTPRGEIRT PAFMPVGTAG TVKAMLPENV RATGADILLG 
NTYHLMLRPT AERVARLGGL HRFMNWDRPI LTDSGGFQVM SLADLRKLSE EGVTFRSHID
GSKHHLSPER SMEIQRLLGS DIVMAFDECP ALPATEEAVA QSMRLSMRWA RRSREAFGDR
PGHALFGIMQ GGVTRDLREE SAAALREIGF EGYAIGGLAV GEGQEAMFGV LDYAPGFLPE
DRPRYLMGVG KPDDIVGAVE RGVDMMDCVL PSRSGRTGQA WTRRGQVNIK NARHMDDPRP
LDEACSCPAC RSYSRAYLHH VFRAQEIIAS MLLTWHNLHY YQELMQGLRT AIAAGRLGEF
VAAFHAARAE GDIEPL