| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1479 |
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| Symbol | |
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| ID | 4898089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1541472 |
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| End bp | 1542053 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640112068 |
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| Product | shikimate kinase |
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| Protein accession | YP_001043361 |
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| Protein GI | 126462247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.298287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.404477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGGC GCGGGAACAG GGAGGATGGC CGGCAAGTGA TGGCGCGGCT GAAGAAAACC
GTTGTGATGG TGGGCATGAT GGGGGCGGGC AAGACGGCCG TGGGCAGCGC GCTGGCCCGG
GGTCTGAACG TGCCCTTTCT CGATTCGGAC GAGGAGATCG AGCGGGCCGC CAACCGGACC
ATCGCCGAAA TCTTCGCCCG CGACGGCGAG CCCTTCTTCC GCGAGAAGGA GAGCCAGGTC
CTCGCGCGGC TCCTGCGCGG CAGCCCCTGC GTGCTCTCCA CCGGCGGCGG CGCCTTCATG
GCCGAGGGCA ACCGCCGCAT GATCCGCGAG CAGGGCGTGT CGGTCTGGCT CAAGGCCGAC
CTCGACGTGC TCTGGCACCG GGTGCGGCAC AAGGCGACGC GGCCGCTCCT GCGCACGCCC
AACCCGCGCG AGACGCTGCG CGCGCTTCTC GAGGCGCGCG ATCCGGTCTA TGCGCAGGCG
GACCTCGCGG TTGAGAGCGG CGAGGGAACG GTGGAACAGA TGGCGGTGCG GGTGCGCGAG
GCGCTGGCTA CCCGCCCCGA TGTGCTGGAG ACGGACGAAT GA
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| Protein sequence | MRRRGNREDG RQVMARLKKT VVMVGMMGAG KTAVGSALAR GLNVPFLDSD EEIERAANRT
IAEIFARDGE PFFREKESQV LARLLRGSPC VLSTGGGAFM AEGNRRMIRE QGVSVWLKAD
LDVLWHRVRH KATRPLLRTP NPRETLRALL EARDPVYAQA DLAVESGEGT VEQMAVRVRE
ALATRPDVLE TDE
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