Gene Rsph17029_1460 details

Gene Information

• Locus tag: Rsph17029_1460
• Symbol: ispF
• ID: 4896911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides ATCC 17029
• Kingdom: Bacteria
• Replicon accession: NC_009049
• Strand: +
• Start bp: 1523341
• End bp: 1523820
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640112048
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001043342
• Protein GI: 126462228
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.748057
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.3725
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGACATCC GCACCGGCAA CGGCTTCGAC GTGCATGCCT TCGGGCCCGG CGATCATGTG 
TGGCTCTGCG GGGTGCGCGT GCCGCACCAT CGCGGGCTGA TCGGCCATTC GGATGCCGAT 
GTGGGCATGC ATGCGCTGAC CGATGCGATC TACGGCGCAC TGGCCGAGGG CGACATCGGC 
GTGCATTTCC CCCCGTCGGA CCCGCAGTGG AAGGGCGCGG CCTCGCGCAT CTTCCTCGAA 
CATGCCATGG GTCGGATCGC GGCGCGCGGC TACACGCTCG CCAACTGCGA CGTGACGCTC 
ATCTGCGAGC GCCCGAAGAT CGGCCCCGTG GCGCCTGCGA TGCGCGAGGC GCTGGCCGAG 
ATCATGGGCA TCGCCGCGGA CCGGATCTCG GTCAAGGCCA CCACCTCCGA GAAGCTGGGC 
TTCACGGGCC GCGAGGAAGG CATTGCCGCC ATCGCGACCG TGGCCCTGCT GCAGGCATGA 

 

Protein sequence

MDIRTGNGFD VHAFGPGDHV WLCGVRVPHH RGLIGHSDAD VGMHALTDAI YGALAEGDIG 
VHFPPSDPQW KGAASRIFLE HAMGRIAARG YTLANCDVTL ICERPKIGPV APAMREALAE 
IMGIAADRIS VKATTSEKLG FTGREEGIAA IATVALLQA