| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1459 |
|---|
| Symbol | |
|---|
| ID | 4896161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1522555 |
|---|
| End bp | 1523232 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640112047 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001043341 |
|---|
| Protein GI | 126462227 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.671958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.381986 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAG CCGCTATCAT CGTCGCCGCC GGACGCGGCA CACGCGCGGG CGGAGACCTG
CCGAAACAGT GGCAGCCGCT CGCGGGCCGG CCGGTGCTGG CCCATACGCT GGCGGCCTTC
CGGGCCGCGG CCGGGGTGAG CCGCACCCTC CTCGTGATCC ATCCCGACGA CCGCGCCCGG
GCTGAAGCGC TTCCGGGTGT GGCCGAGGGC AAGGTCGAAC TCGTCGAGGG CGGCGCCTCG
CGCGACGCCT CGGTGCGCAA TGCGCTCGAG GCGCTGGCCG GGGCGGGCAT CGAGCGGGTG
CTGATCCATG ACGGCGCACG CCCCCTCGTG GCGCCGGGGC TGATCGCGCG GACGCTCGCC
GCCCTCGAGA CGGCGCCGGG CGCCGCGCCG GCCGTGCCGG TCTCGGATGC GCTCTGGCGC
GGCGAAGGCG GCCGCGTCGT GGGCACGCAG GACCGCACCG GCCTCTTTCG CGCGCAGACC
CCGCAGGCCT TCCGCTATGA GGCGATCCTT GCCGCCCACC GCGCCCATCC GGGCGGGGCC
GCCGACGATG TCGAGGTGGC CCGTGCGGCC GGGCTCGAGG TGGCCATCGT CGAGGGCTGC
GAGGACAATC TGAAAGTGAC CTATCCCGGC GATTTCGCGC GGGCCGAGCG GCTGCTCGCG
CTTGCGGCCG GGCTCTGA
|
|---|
| Protein sequence | MTTAAIIVAA GRGTRAGGDL PKQWQPLAGR PVLAHTLAAF RAAAGVSRTL LVIHPDDRAR
AEALPGVAEG KVELVEGGAS RDASVRNALE ALAGAGIERV LIHDGARPLV APGLIARTLA
ALETAPGAAP AVPVSDALWR GEGGRVVGTQ DRTGLFRAQT PQAFRYEAIL AAHRAHPGGA
ADDVEVARAA GLEVAIVEGC EDNLKVTYPG DFARAERLLA LAAGL
|
|---|
| |