| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1458 |
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| Symbol | |
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| ID | 4896454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1521361 |
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| End bp | 1522341 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640112046 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001043340 |
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| Protein GI | 126462226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.425307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCTTC GCATCGCTCA GCTTCCGGTG GATCCGCCGG TGCTCCTCGC GCCGATGGCG
GGAATTACGG ATCTTCCCTT CCGGCGCCTT GCCGTCCGCT TCGGCGCCGG GCTGGTCGTC
TCCGAGATGG TGGCGAGCCG CGAGGTGGTC TGCGCGGGCG CCGAGGCGCG GGCGCGGGCC
GAGATCGGCG CCGCCGAGGG ACGCACGGCG GTGCAGCTGG CGGGGTGCGA TCCGCACTGG
ATGGCCGAGG CCGCGCGGCT GGTCGAGGCG CAGGGGGCCC GCATCATCGA CATCAACATG
GGCTGCCCCG CCAAGCGGGT CACGAACGGC TGGTCGGGCT CGGCCCTGAT GCGCGAGCCC
GACCGGGCGC TTGCGCTGAT CGAGGCGGTG GTGGGGGCGG TCGCGGTGCC GGTCACGCTC
AAGATGCGGC TGGGCTGGGA CGAGGGGATG CTGAATGCGC CCGAGATCGC GCGGCGCGCC
GAAGCGGCGG GGGTGGCGAT GATCACGATC CATGGCCGCA CGCGCTGCCA GTTCTACACC
GGCCGCGCCG ACTGGGCCGC GATCCGCCCG GTGGTCGAGG CGGTCTCGGT GCCGGTGGTG
GCCAATGGCG ACATCACGGG GCCCGAGGAG GCGCAGGCGG CGCTGGCGGC CTCGGGGGCT
GCGGGCGTCA TGGTCGGGCG CGGCGCGCAG GGCCGGCCCT GGCTTCTCGG ACAGGTGGCC
TCGGCGCTCG ACGGGCGCGC GGCACCCGAC GTGCCCGAGG GAGAGGCGCT CGCCGATCTG
GTCGTGGCCC ATTACGAGGA GATGCTCTCT TTCTACGGGC GCGACCTCGG GCTGCGCGTC
GCGCGCAAAC ATCTCAACTG GTATCTCGAG GCCGCGGGTC TGGCGGCGCA CCGGGGCCCC
ATCGTGACCG GAACCGATCC GGCCCGGGTG GTCCGCGCGC TGCGGCAGGC CTTCGGCGCA
CAGGAAAGGG CCGCCGCATG A
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| Protein sequence | MALRIAQLPV DPPVLLAPMA GITDLPFRRL AVRFGAGLVV SEMVASREVV CAGAEARARA
EIGAAEGRTA VQLAGCDPHW MAEAARLVEA QGARIIDINM GCPAKRVTNG WSGSALMREP
DRALALIEAV VGAVAVPVTL KMRLGWDEGM LNAPEIARRA EAAGVAMITI HGRTRCQFYT
GRADWAAIRP VVEAVSVPVV ANGDITGPEE AQAALAASGA AGVMVGRGAQ GRPWLLGQVA
SALDGRAAPD VPEGEALADL VVAHYEEMLS FYGRDLGLRV ARKHLNWYLE AAGLAAHRGP
IVTGTDPARV VRALRQAFGA QERAAA
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